Publications by authors named "Markus List"

Claim this Profile
R
Reticulated platelets in coronary artery disease: a multidimensional approach unveils prothrombotic signalling and novel therapeutic targets.
Kilian Kirmes, Jiaying Han, Melissa Klug, Conor J Bloxham, Olena Babyak, Markus List

Eur Heart J· December 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
N
NApy: Efficient Statistics in Python for Large-Scale Heterogeneous Data with Enhanced Support for Missing Data.
Fabian Woller, Lis Arend, Christian Fuchsberger, Markus List, David B Blumenthal

Gigascience· November 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
Mapping drug mechanisms with ProteomicsDB: unified omics and cell sensitivity data at scale.
Mario Picciani, Armin Soleymaniniya, Julian Müller, Amirhossein Sakhteman, Konstantinos Tzanakis, Markus List

Nucleic Acids Res· November 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
Comparison of Different Sites of Microbiota Shows Increased Pseudomonas Species in the Gut Mucosa in Inflammatory Bowel Disease.
David Schult-Hannemann, Christina Gassner, Niklas Thur, Chiara Hennig, Lisa Fricke, Markus List

Inflamm Bowel Dis· October 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
U
Unifying DNA methylation-based cell-type deconvolution with .
Alexander Dietrich, Lina-Liv Willruth, Korbinian Pürckhauer, Carlos Oltmanns, Moana Witte, Markus List

Bioinform Adv· September 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Integrative gene and isoform co-expression networks reveal regulatory rewiring in stress-related psychiatric disorders.
Ghalia Rehawi, Jonas Hagenberg, , , Philipp G Sämann, Markus List

iScience· September 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
E
Extracellular vesicle-associated transcriptomic and proteomic biomarkers show in vitro potential for vandetanib treatment monitoring in anaplastic thyroid cancer.
Christian Grätz, Prashant Changoer, Dapi Menglin Chiang, Johannes Kersting, Martin Jaeger, Markus List

Sci Rep· September 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
N
Next-generation deconvolution of the tumor microenvironment with omnideconv.
Lorenzo Merotto, Alexander Dietrich, Markus List, Francesca Finotello

Methods Cell Biol· August 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
D
DIGGER 2.0: digging into the functional impact of differential splicing on human and mouse disorders.
Elias Albrecht, Konstantin Pelz, Alexander Gress, Hieu Nguyen Trung, Olga V Kalinina, Markus List

Nucleic Acids Res· July 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
R
Refinement strategies for Tangram for reliable single-cell to spatial mapping.
Merle Stahl, Lena J Straßer, Chit Tong Lio, Judith Bernett, Richard Röttger, Markus List

Bioinformatics· July 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
D
Deep learning models for unbiased sequence-based PPI prediction plateau at an accuracy of 0.65.
Timo Reim, Anne Hartebrodt, David B Blumenthal, Judith Bernett, Markus List

Bioinformatics· July 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
E
Endoscopic healing in pediatric IBD perpetuates a persistent signature defined by Th17 cells with molecular and microbial drivers of disease.
Kolja Siebert, Tim Faro, Nikolai Köhler, Hannes Hölz, Sebastian Jarosch, Markus List

Cell Rep Med· July 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
S
Single-cell differential expression analysis between conditions within nested settings.
Leon Hafner, Gregor Sturm, Sarah Lumpp, Mathias Drton, Markus List

Brief Bioinform· July 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
S
Systematic evaluation of normalization approaches in tandem mass tag and label-free protein quantification data using PRONE.
Lis Arend, Klaudia Adamowicz, Johannes R Schmidt, Yuliya Burankova, Olga Zolotareva, Markus List

Brief Bioinform· May 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
Alternative Splicing in Mechanically Stretched Podocytes as a Model of Glomerular Hypertension.
Francescapaola Mattias, Olga Tsoy, Elke Hammer, Alexander Gress, Stefan Simm, Markus List

J Am Soc Nephrol· May 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
P
Persistent desmoglein-1 downregulation and periostin accumulation in histologic remission of eosinophilic esophagitis.
Hannes Hoelz, Tim Faro, Marie-Luise Frank, Ignasi Forné, Daniela Kugelmann, Markus List

J Allergy Clin Immunol· February 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
D
DysRegNet: Patient-specific and confounder-aware dysregulated network inference towards precision therapeutics.
Johannes Kersting, Olga Lazareva, Zakaria Louadi, Jan Baumbach, David B Blumenthal, Markus List

Br J Pharmacol· December 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
E
Emergence of power law distributions in protein-protein interaction networks through study bias.
David B Blumenthal, Marta Lucchetta, Linda Kleist, Sándor P Fekete, Markus List

Elife· December 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
E
Exclusive enteral nutrition initiates individual protective microbiome changes to induce remission in pediatric Crohn's disease.
Deborah Häcker, Kolja Siebert, Byron J Smith, Nikolai Köhler, Alessandra Riva, Markus List

Cell Host Microbe· November 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
AI in microbiome-related healthcare.
Niklas Probul, Zihua Huang, Christina Caroline Saak, Jan Baumbach, Markus List

Microb Biotechnol· November 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
Meta-analysis of proteomics data from osteoblasts, bone, and blood: Insights into druggable targets, active factors, and potential biomarkers for bone biomaterial design.
Johannes R Schmidt, Klaudia Adamowicz, Lis Arend, Jörg Lehmann, Markus List

J Tissue Eng· November 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
MeTEor: an R Shiny app for exploring longitudinal metabolomics data.
Gordon Grabert, Daniel Dehncke, Tushar More, Markus List, Anke R M Kraft

Bioinform Adv· November 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
N
Network medicine-based epistasis detection in complex diseases: ready for quantum computing.
Markus Hoffmann, Julian M Poschenrieder, Massimiliano Incudini, Sylvie Baier, Amelie Fritz, Markus List

Nucleic Acids Res· September 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
Mitochondrial perturbation in the intestine causes microbiota-dependent injury and gene signatures discriminative of inflammatory disease.
Elisabeth Urbauer, Doriane Aguanno, Nora Mindermann, Hélène Omer, Amira Metwaly, Markus List

Cell Host Microbe· August 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
G
Guiding questions to avoid data leakage in biological machine learning applications.
Judith Bernett, David B Blumenthal, Dominik G Grimm, Florian Haselbeck, Roman Joeres, Markus List

Nat Methods· August 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis