Publications by authors named "Martin Strazar"

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Spatial host-microbiome sequencing reveals niches in the mouse gut.
Britta Lötstedt, Martin Stražar, Ramnik Xavier, Aviv Regev, Sanja Vickovic

Nat Biotechnol· September 2024

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Commensal consortia decolonize Enterobacteriaceae via ecological control.
Munehiro Furuichi, Takaaki Kawaguchi, Marie-Madlen Pust, Keiko Yasuma-Mitobe, Damian R Plichta

Nature· September 2024

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Gut microbiome and metabolome profiling in Framingham heart study reveals cholesterol-metabolizing bacteria.
Chenhao Li, Martin Stražar, Ahmed M T Mohamed, Julian A Pacheco, Rebecca L Walker

Cell· April 2024

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Linking microbial genes to plasma and stool metabolites uncovers host-microbial interactions underlying ulcerative colitis disease course.
Melanie Schirmer, Martin Stražar, Julian Avila-Pacheco, Daniel F Rojas-Tapias, Eric M Brown

Cell Host Microbe· February 2024

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Cytotoxic Th1 cells mushroom after fungal exposures in Crohn's disease.
Martin Stražar, Ramnik J Xavier

Immunity· December 2023

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Rationally-defined microbial consortia suppress multidrug-resistant proinflammatory Enterobacteriaceae via ecological control.
Kenya Honda, Munehiro Furuichi, Takaaki Kawaguchi, Marie-Madlen Pust, Keiko Yasuma-Mitobe

Res Sq· October 2023

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HLA-II immunopeptidome profiling and deep learning reveal features of antigenicity to inform antigen discovery.
Martin Stražar, Jihye Park, Jennifer G Abelin, Hannah B Taylor, Thomas K Pedersen

Immunity· July 2023

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Mobile genetic elements from the maternal microbiome shape infant gut microbial assembly and metabolism.
Tommi Vatanen, Karolina S Jabbar, Terhi Ruohtula, Jarno Honkanen, Julian Avila-Pacheco

Cell· December 2022

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A distinct clade of Bifidobacterium longum in the gut of Bangladeshi children thrives during weaning.
Tommi Vatanen, Qi Yan Ang, Léa Siegwald, Shafiqul Alam Sarker, Caroline I Le Roy

Cell· November 2022

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The influence of the gut microbiome on BCG-induced trained immunity.
Martin Stražar, Vera P Mourits, Valerie A C M Koeken, L Charlotte J de Bree, Simone J C F M Moorlag

Genome Biol· September 2021

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Author Correction: Gut microbiome-mediated metabolism effects on immunity in rural and urban African populations.
Martin Stražar, Godfrey S Temba, Hera Vlamakis, Vesla I Kullaya, Furaha Lyamuya

Nat Commun· September 2021

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Gut microbiome-mediated metabolism effects on immunity in rural and urban African populations.
Martin Stražar, Godfrey S Temba, Hera Vlamakis, Vesla I Kullaya, Furaha Lyamuya

Nat Commun· August 2021

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Publisher Correction: Gut microbiome-mediated metabolism effects on immunity in rural and urban African populations.
Martin Stražar, Godfrey S Temba, Hera Vlamakis, Vesla I Kullaya, Furaha Lyamuya

Nat Commun· August 2021

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Democratized image analytics by visual programming through integration of deep models and small-scale machine learning.
Primož Godec, Matjaž Pančur, Nejc Ilenič, Andrej Čopar, Martin Stražar

Nat Commun· October 2019

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scOrange-a tool for hands-on training of concepts from single-cell data analytics.
Martin Stražar, Lan Žagar, Jaka Kokošar, Vesna Tanko, Aleš Erjavec

Bioinformatics· July 2019

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Orthogonal matrix factorization enables integrative analysis of multiple RNA binding proteins.
Martin Stražar, Marinka Žitnik, Blaž Zupan, Jernej Ule, Tomaž Curk

Bioinformatics· May 2016

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Yeast as a cell factory: current state and perspectives.
Martin Kavšček, Martin Stražar, Tomaž Curk, Klaus Natter, Uroš Petrovič

Microb Cell Fact· June 2015

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A bistable genetic switch based on designable DNA-binding domains.
Tina Lebar, Urban Bezeljak, Anja Golob, Miha Jerala, Lucija Kadunc

Nat Commun· September 2014

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