Publications by authors named "Matthias Benoit"

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Solanum pan-genetics reveals paralogues as contingencies in crop engineering.
Matthias Benoit, Katharine M Jenike, James W Satterlee, Srividya Ramakrishnan, Iacopo Gentile

Nature· April 2025

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Epigenetic control during root development and symbiosis.
María Eugenia Zanetti, Flavio Blanco, Milagros Ferrari, Federico Ariel, Matthias Benoit

Plant Physiol· October 2024

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Convergent evolution of plant prickles by repeated gene co-option over deep time.
James W Satterlee, David Alonso, Pietro Gramazio, Katharine M Jenike, Jia He, Matthias Benoit

Science· August 2024

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Establishing Physalis as a Solanaceae model system enables genetic reevaluation of the inflated calyx syndrome.
Jia He, Michael Alonge, Srividya Ramakrishnan, Matthias Benoit, Sebastian Soyk

Plant Cell· January 2023

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Four to the floor: Active DNA demethylation defines somatic epigenetic patterns and impacts quantitative traits.
Matthias Benoit

Plant Cell· March 2022

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Hot 'n cold: Applying the cis-regulatory code to predict heat and cold stress response in maize.
Matthias Benoit

Plant Cell· January 2022

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From non-self to self: stepwise mutations in transcription factors promote the transition to self-pollination in tomato.
Matthias Benoit

Plant Cell· October 2021

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A Predictive Approach to Infer the Activity and Natural Variation of Retrotransposon Families in Plants.
Matthias Benoit, Hajk-Georg Drost

Methods Mol Biol· June 2021

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The right dose: molecular compensation maintains rRNA homeostasis upon reduction of ribosomal gene dosage in Arabidopsis.
Matthias Benoit

Plant Cell· May 2021

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Dissecting cis-regulatory control of quantitative trait variation in a plant stem cell circuit.
Xingang Wang, Lyndsey Aguirre, Daniel Rodríguez-Leal, Anat Hendelman, Matthias Benoit

Nat Plants· April 2021

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Slice and Dice: DCL2 Mediates the Production of 22-Nucleotide siRNAs that Influence Trait Variation in Soybean.
Matthias Benoit

Plant Cell· December 2020

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New Horizons for Dissecting Epistasis in Crop Quantitative Trait Variation.
Sebastian Soyk, Matthias Benoit, Zachary B Lippman

Annu Rev Genet· November 2020

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The Great Escape: How a Plant DNA Virus Hijacks an Imprinted Host Gene to Avoid Silencing.
Matthias Benoit

Plant Cell· October 2020

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In the Transcripts: Long-Read Transcriptomics Enables a Novel Type of Transposable Element Annotation in Plants.
Matthias Benoit

Plant Cell· September 2020

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Glyphosate Resistance Decoded: The Reference Sequence of the Extrachromosomal DNA Replicon in Amaranth.
Matthias Benoit

Plant Cell· July 2020

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Shooting for the STARRs: A Modified STARR-seq Assay for Rapid Identification and Evaluation of Plant Regulatory Sequences in Tobacco Leaves.
Matthias Benoit

Plant Cell· July 2020

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Major Impacts of Widespread Structural Variation on Gene Expression and Crop Improvement in Tomato.
Michael Alonge, Xingang Wang, Matthias Benoit, Sebastian Soyk, Lara Pereira

Cell· July 2020

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On the Importance of Variation: A High-Resolution Map of Copy Number Variants in Arabidopsis.
Matthias Benoit

Plant Cell· June 2020

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Environmental and epigenetic regulation of Rider retrotransposons in tomato.
Matthias Benoit, Hajk-Georg Drost, Marco Catoni, Quentin Gouil, Sara Lopez-Gomollon

PLoS Genet· September 2019

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Replication-coupled histone H3.1 deposition determines nucleosome composition and heterochromatin dynamics during Arabidopsis seedling development.
Matthias Benoit, Lauriane Simon, Sophie Desset, Céline Duc, Sylviane Cotterell

New Phytol· January 2019

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Sensitive detection of pre-integration intermediates of long terminal repeat retrotransposons in crop plants.
Jungnam Cho, Matthias Benoit, Marco Catoni, Hajk-Georg Drost, Anna Brestovitsky

Nat Plants· January 2019

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Arabidopsis ATRX Modulates H3.3 Occupancy and Fine-Tunes Gene Expression.
Céline Duc, Matthias Benoit, Gwénaëlle Détourné, Lauriane Simon, Axel Poulet

Plant Cell· July 2017

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The LINC complex contributes to heterochromatin organisation and transcriptional gene silencing in plants.
Axel Poulet, Céline Duc, Maxime Voisin, Sophie Desset, Sylvie Tutois, Matthias Benoit

J Cell Sci· February 2017

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The histone chaperone complex HIR maintains nucleosome occupancy and counterbalances impaired histone deposition in CAF-1 complex mutants.
Céline Duc, Matthias Benoit, Samuel Le Goff, Lauriane Simon, Axel Poulet

Plant J· March 2015

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Heterochromatin dynamics during developmental transitions in Arabidopsis - a focus on ribosomal DNA loci.
Matthias Benoit, Elodie Layat, Sylvette Tourmente, Aline V Probst

Gene· August 2013

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