Publications by authors named "Matthieu Foll"

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Digital Immunophenotyping of Lung Atypical Carcinoids and Large Cell Neuroendocrine Carcinomas Identifies Three Subtypes With Specific Tumor-Immune Microenvironment Features.
Giovanni Centonze, Patrick Maisonneuve, Émilie Mathian, Federica Grillo, Giovanna Sabella, Matthieu Foll

Endocr Pathol· October 2025

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Identification of Defined Molecular Subgroups on the Basis of Immunohistochemical Analyses and Potential Therapeutic Vulnerabilities of Pulmonary Carcinoids.
Daphne J G Leunissen, Laura Moonen, Jan H von der Thüsen, Michael A den Bakker, Lisa M Hillen, Matthieu Foll

J Thorac Oncol· April 2025

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Basic science and translational implications of current knowledge on neuroendocrine tumors.
Lynnette Fernandez-Cuesta, Nicolas Alcala, Emilie Mathian, Jules Derks, Chrissie Thirlwell, Matthieu Foll

J Clin Invest· March 2025

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Expression and Clinical Outcome in Pulmonary Carcinoids.
Lisa Werr, Christoph Bartenhagen, Carolina Rosswog, Maria Cartolano, Catherine Voegele, Matthieu Foll

J Clin Oncol· January 2025

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Understanding the biological processes of kidney carcinogenesis: an integrative multi-omics approach.
Ricardo Cortez Cardoso Penha, Alexandra Sexton Oates, Sergey Senkin, Hanla A Park, Joshua Atkins, Matthieu Foll

Mol Syst Biol· December 2024

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Clinical management of typical and atypical carcinoids/neuroendocrine tumors in ENETS centres of excellence (CoE): Survey from the ENETS lung NET task force.
Anna Koumarianou, Pier Luigi Filosso, Lisa Bodei, Justo P Castano, Lynnette Fernandez-Cuesta, Matthieu Foll

J Neuroendocrinol· August 2024

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Multi-omic dataset of patient-derived tumor organoids of neuroendocrine neoplasms.
Nicolas Alcala, Catherine Voegele, Lise Mangiante, Alexandra Sexton-Oates, Hans Clevers, Matthieu Foll

Gigascience· January 2024

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Altered splicing machinery in lung carcinoids unveils NOVA1, PRPF8 and SRSF10 as novel candidates to understand tumor biology and expand biomarker discovery.
Ricardo Blázquez-Encinas, Víctor García-Vioque, Teresa Caro-Cuenca, María Trinidad Moreno-Montilla, Federica Mangili, Matthieu Foll

J Transl Med· December 2023

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Druggable growth dependencies and tumor evolution analysis in patient-derived organoids of neuroendocrine neoplasms from multiple body sites.
Talya L Dayton, Nicolas Alcala, Laura Moonen, Lisanne den Hartigh, Veerle Geurts, Matthieu Foll

Cancer Cell· December 2023

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Spotlight on Small-Cell Lung Cancer and Other Lung Neuroendocrine Neoplasms.
Lynnette Fernandez-Cuesta, Alexandra Sexton-Oates, Leyla Bayat, Matthieu Foll, Sally C M Lau

Am Soc Clin Oncol Educ Book· May 2023

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Multiomic analysis of malignant pleural mesothelioma identifies molecular axes and specialized tumor profiles driving intertumor heterogeneity.
Lise Mangiante, Nicolas Alcala, Alexandra Sexton-Oates, Alex Di Genova, Abel Gonzalez-Perez, Matthieu Foll

Nat Genet· April 2023

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A molecular phenotypic map of malignant pleural mesothelioma.
Alex Di Genova, Lise Mangiante, Alexandra Sexton-Oates, Catherine Voegele, Lynnette Fernandez-Cuesta, Matthieu Foll

Gigascience· December 2022

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Genetic Analysis of Lung Cancer and the Germline Impact on Somatic Mutation Burden.
Aurélie A G Gabriel, Joshua R Atkins, Ricardo C C Penha, Karl Smith-Byrne, Valerie Gaborieau, Matthieu Foll

J Natl Cancer Inst· August 2022

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Differential Orthopedia Homeobox expression in pulmonary carcinoids is associated with changes in DNA methylation.
Laura Moonen, Lise Mangiante, Daphne J G Leunissen, Lisa M V Lap, Aurelie Gabriel, Matthieu Foll

Int J Cancer· June 2022

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Detection of acquired TERT amplification in addition to predisposing p53 and Rb pathways alterations in EGFR-mutant lung adenocarcinomas transformed into small-cell lung cancers.
Anne Mc Leer, Matthieu Foll, Marie Brevet, Martine Antoine, Silvia Novello

Lung Cancer· May 2022

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Targeted Deep Sequencing of Cell-Free DNA in Esophageal Squamous Cell Carcinoma Using Low-Quality Serum: Concordance with Tumor Mutation.
Dariush Nasrollahzadeh, Gholamreza Roshandel, Tiffany Myriam Delhomme, Patrice Hodonou Avogbe, Matthieu Foll

Int J Mol Sci· May 2021

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Challenges in lung and thoracic pathology: molecular advances in the classification of pleural mesotheliomas.
Lynnette Fernandez-Cuesta, Lise Mangiante, Nicolas Alcala, Matthieu Foll

Virchows Arch· January 2021

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Detecting Selection from Linked Sites Using an -Model.
Marco Galimberti, Christoph Leuenberger, Beat Wolf, Sándor Miklós Szilágyi, Matthieu Foll

Genetics· December 2020

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Development of Sensitive Droplet Digital PCR Assays for Detecting Urinary Promoter Mutations as Non-Invasive Biomarkers for Detection of Urothelial Cancer.
Md Ismail Hosen, Nathalie Forey, Geoffroy Durand, Catherine Voegele, Selin Bilici, Matthieu Foll

Cancers (Basel)· November 2020

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A molecular map of lung neuroendocrine neoplasms.
Aurélie A G Gabriel, Emilie Mathian, Lise Mangiante, Catherine Voegele, Vincent Cahais, Matthieu Foll

Gigascience· October 2020

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Needlestack: an ultra-sensitive variant caller for multi-sample next generation sequencing data.
Tiffany M Delhomme, Patrice H Avogbe, Aurélie A G Gabriel, Nicolas Alcala, Noemie Leblay, Matthieu Foll

NAR Genom Bioinform· June 2020

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Circulating tumour-derived KRAS mutations in pancreatic cancer cases are predominantly carried by very short fragments of cell-free DNA.
Maria Zvereva, Gabriel Roberti, Geoffroy Durand, Catherine Voegele, Minh Dao Nguyen, Matthieu Foll

EBioMedicine· May 2020

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Urinary TERT promoter mutations are detectable up to 10 years prior to clinical diagnosis of bladder cancer: Evidence from the Golestan Cohort Study.
Md Ismail Hosen, Mahdi Sheikh, Maria Zvereva, Ghislaine Scelo, Nathalie Forey, Matthieu Foll

EBioMedicine· March 2020

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Molecular studies of lung neuroendocrine neoplasms uncover new concepts and entities.
Lynnette Fernandez-Cuesta, Matthieu Foll

Transl Lung Cancer Res· December 2019

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Redefining malignant pleural mesothelioma types as a continuum uncovers immune-vascular interactions.
Nicolas Alcala, Lise Mangiante, Nolwenn Le-Stang, Corinne E Gustafson, Sandrine Boyault, Matthieu Foll

EBioMedicine· October 2019

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