Publications by authors named "Misako Aida"

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Molecular basis of N-glycan recognition by pradimicin a and its potential as a SARS-CoV-2 entry inhibitor.
Yu Nakagawa, Masato Fujii, Nanaka Ito, Makoto Ojika, Dai Akase, Misako Aida

Bioorg Med Chem· May 2024

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d-Mannose binding, aggregation property, and antifungal activity of amide derivatives of pradimicin A.
Wataru Miyanishi, Makoto Ojika, Dai Akase, Misako Aida, Yasuhiro Igarashi

Bioorg Med Chem· February 2022

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siRNA Seed Region Is Divided into Two Functionally Different Domains in RNA Interference in Response to 2'-OMe Modifications.
Yoshiaki Kobayashi, Daiki Fukuhara, Dai Akase, Misako Aida, Kumiko Ui-Tei

ACS Omega· January 2022

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Selection of Chemical Modifications in the siRNA Seed Region That Repress Off-Target Effect.
Yoshiaki Kobayashi, Kengo Miyamoto, Misako Aida, Kumiko Ui-Tei

Methods Mol Biol· June 2021

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Effect of Molecular Weight on Cloud Point of Aqueous Solution of Poly (ethylene oxide)-Poly (propylene oxide) Alternating Multiblock Copolymer.
Tasuku Horiuchi, Kazuaki Rikiyama, Kenji Sakanaya, Yusuke Sanada, Keisuke Watanabe, Misako Aida

J Oleo Sci· May 2020

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Photo-Induced Ring-Opening Reaction of Flav-3-en-2-ol Monitored by Time-Resolved Infrared Spectroscopy.
Masato Kondoh, Akira Sakuta, Kazuki Okazawa, Dai Akase, Misako Aida

J Phys Chem B· October 2019

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Molecular Basis of Mannose Recognition by Pradimicins and their Application to Microbial Cell Surface Imaging.
Yu Nakagawa, Takashi Doi, K Takegoshi, Takahiro Sugahara, Dai Akase, Misako Aida

Cell Chem Biol· July 2019

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Structural Effects of Fusicoccin upon Upregulation of 14-3-3-Phospholigand Interaction and Cytotoxic Activity.
Junko Ohkanda, Atsushi Kusumoto, Louvy Punzalan, Ryoma Masuda, Chenyu Wang, Misako Aida

Chemistry· October 2018

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Association Behavior of Poly(ethylene oxide)-Poly(propylene oxide) Alternating Multiblock Copolymers in Water toward Thermally Induced Phase Separation.
Tasuku Horiuchi, Takamasa Sakai, Yusuke Sanada, Keisuke Watanabe, Misako Aida

Langmuir· December 2017

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Correction to "Chemical Modification of the siRNA Seed Region Suppresses Off-Target Effects by Steric Hindrance to Base-Pairing with Targets".
Hanna Iribe, Kengo Miyamoto, Tomoko Takahashi, Yoshiaki Kobayashi, Justina Leo, Misako Aida

ACS Omega· June 2017

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Chemical Modification of the siRNA Seed Region Suppresses Off-Target Effects by Steric Hindrance to Base-Pairing with Targets.
Hanna Iribe, Kengo Miyamoto, Tomoko Takahashi, Yoshiaki Kobayashi, Jastina Leo, Misako Aida

ACS Omega· May 2017

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Hydration structure of trimethylamine N-oxide in aqueous solutions revealed by soft X-ray emission spectroscopy and chemometric analysis.
Yuu Sasaki, Yuka Horikawa, Takashi Tokushima, Kazumasa Okada, Masaki Oura, Misako Aida

Phys Chem Chem Phys· October 2016

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Electronic origin of the dependence of hydrogen bond strengths on nearest-neighbor and next-nearest-neighbor hydrogen bonds in polyhedral water clusters (H2O)n, n = 8, 20 and 24.
Suehiro Iwata, Dai Akase, Misako Aida, Sotiris S Xantheas

Phys Chem Chem Phys· July 2016

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Synthesis and biological activities of the amide derivative of aplog-1, a simplified analog of aplysiatoxin with anti-proliferative and cytotoxic activities.
Yusuke Hanaki, Ryo C Yanagita, Takahiro Sugahara, Misako Aida, Harukuni Tokuda

Biosci Biotechnol Biochem· March 2016

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Crosslinking reactions of 4-amino-6-oxo-2-vinylpyrimidine with guanine derivatives and structural analysis of the adducts.
Shuhei Kusano, Shogo Ishiyama, Sik Lok Lam, Tsukasa Mashima, Masato Katahira, Misako Aida

Nucleic Acids Res· September 2015

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Fundamental frequency from classical molecular dynamics.
Tomonori Yamada, Misako Aida

Phys Chem Chem Phys· February 2015

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Distribution of topologically distinct isomers of water clusters and dipole moments of constituent water molecules at finite atmospheric temperatures.
Dai Akase, Misako Aida

J Phys Chem A· September 2014

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Structures of molecules in ground and excited vibrational states from quasiclassical direct ab initio molecular dynamics.
Tomonori Yamada, Misako Aida

J Phys Chem A· June 2010

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Self-assembled monolayers of double-chain disulfides of adenine on Au: an IR-UV sum-frequency generation spectroscopic study.
Tetsuhiko Nagahara, Takumi Suemasu, Misako Aida, Taka-aki Ishibashi

Langmuir· January 2010

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Chiral sum frequency spectroscopy of thin films of porphyrin J-aggregates.
Tetsuhiko Nagahara, Kenji Kisoda, Hiroshi Harima, Misako Aida, Taka-Aki Ishibashi

J Phys Chem B· April 2009

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Classification of OH bonds and infrared spectra of the topology-distinct protonated water clusters H3O+ (H2O)(n-1) (n < or = 7).
Maihemutijiang Jieli, Misako Aida

J Phys Chem A· February 2009

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An insight into the environmental effects of the pocket of the active site of the enzyme. Ab initio ONIOM-molecular dynamics (MD) study on cytosine deaminase.
Toshiaki Matsubara, Michel Dupuis, Misako Aida

J Comput Chem· February 2008

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Two-dimensional free-energy surface on the exchange reaction of alkyl chloride/chloride using the QM/MM-MC method.
Masayuki Ohisa, Hiroshi Yamataka, Michel Dupuis, Misako Aida

Phys Chem Chem Phys· February 2008

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Kinetic investigations of the process of encapsulation of small hydrocarbons into a cavitand-porphyrin.
Jun Nakazawa, Yoshitake Sakae, Misako Aida, Yoshinori Naruta

J Org Chem· December 2007

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Ab initio ONIOM-molecular dynamics (MD) study on the deamination reaction by cytidine deaminase.
Toshiaki Matsubara, Michel Dupuis, Misako Aida

J Phys Chem B· August 2007

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