Publications by authors named "Nathan Rollins"

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Results of the Protein Engineering Tournament: An Open Science Benchmark for Protein Modeling and Design.
Chase Armer, Hassan Kane, Dana L Cortade, Henning Redestig, David A Estell, Nathan Rollins

Proteins· November 2025

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MaveDB 2024: a curated community database with over seven million variant effects from multiplexed functional assays.
Alan F Rubin, Jeremy Stone, Aisha Haley Bianchi, Benjamin J Capodanno, Estelle Y Da, Joshua E Rollins, Nathan J Rollins

Genome Biol· January 2025

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Machine learning for functional protein design.
Pascal Notin, Nathan Rollins, Yarin Gal, Chris Sander, Debora Marks

Nat Biotechnol· February 2024

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Protein design using structure-based residue preferences.
David Ding, Ada Y Shaw, Sam Sinai, Nathan Rollins, Noam Prywes

Nat Commun· February 2024

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ProteinGym: Large-Scale Benchmarks for Protein Design and Fitness Prediction.
Pascal Notin, Aaron W Kollasch, Daniel Ritter, Lood van Niekerk, Steffanie Paul, Nathan Rollins

bioRxiv· December 2023

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Learning from prepandemic data to forecast viral escape.
Nicole N Thadani, Sarah Gurev, Pascal Notin, Noor Youssef, Nathan J Rollins

Nature· October 2023

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High-Content Screening and Computational Prediction Reveal Viral Genes That Suppress the Innate Immune Response.
Tai L Ng, Erika J Olson, Tae Yeon Yoo, H Sloane Weiss, Yukiye Koide, Nathan J Rollins

mSystems· April 2022

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Natural and Designed Proteins Inspired by Extremotolerant Organisms Can Form Condensates and Attenuate Apoptosis in Human Cells.
Mike T Veling, Dan T Nguyen, Nicole N Thadani, Michela E Oster, Nathan J Rollins

ACS Synth Biol· March 2022

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Exploring targeting peptide-shell interactions in encapsulin nanocompartments.
Wiggert J Altenburg, Nathan Rollins, Pamela A Silver, Tobias W Giessen

Sci Rep· March 2021

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Multiplexed measurement of variant abundance and activity reveals VKOR topology, active site and human variant impact.
Melissa A Chiasson, Nathan J Rollins, Jason J Stephany, Katherine A Sitko, Kenneth A Matreyek

Elife· September 2020

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Inferring protein 3D structure from deep mutation scans.
Nathan J Rollins, Kelly P Brock, Frank J Poelwijk, Michael A Stiffler, Nicholas P Gauthier

Nat Genet· July 2019

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Chimeric Fatty Acyl-Acyl Carrier Protein Thioesterases Provide Mechanistic Insight into Enzyme Specificity and Expression.
Marika Ziesack, Nathan Rollins, Aashna Shah, Brendon Dusel, Gordon Webster

Appl Environ Microbiol· May 2018

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