Publications by authors named "Nicholas Denko"

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Development of Selective and Soluble Mitochondrial Complex 1 Inhibitors Derived from Papaverine for Radiosensitization of Cancer.
Ben J Haines, McKenzie Kreamer, Martin Benej, Shabber Mohammed, Haylee Bridge, Nicholas C Denko

J Med Chem· November 2025

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Epigenetic Modulation, Intratumoral Microbiome, and Immunity in Early-Onset Colorectal Cancer.
Ning Jin, Rebecca Hoyd, Ayse S Yilmaz, Jiangjiang Zhu, Yunzhou Liu, Nicholas Denko

Cancer Res Commun· November 2025

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Tumor-associated NK Cells Regulate Distinct CD8+ T-cell Differentiation Program in Cancer and Contribute to Resistance against Immune Checkpoint Blockers.
No-Joon Song, Juan Xie, Kyeong Joo Jung, Yi Wang, Joanna Pozniak, Nicholas Denko

Cancer Discov· September 2025

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Reply to: Beyond the Score: Integrating Hypoxia Signatures Into Risk-Adapted Stereotactic Body Radiation Therapy for Early-Stage Non-Small Cell Lung Cancer.
Nicholas J Eustace, Terence M Williams, Nicholas C Denko

JCO Precis Oncol· September 2025

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Hypoxic Gene Expression Signature as a Predictor of Recurrence and Mortality in Early-Stage Non-Small Cell Lung Cancer Treated With Stereotactic Body Radiation Therapy.
Nicholas J Eustace, Nikhil T Sebastian, Amy Webb, Konstantin Shilo, Ryan Robb, Nicholas C Denko

JCO Precis Oncol· June 2025

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Epigenetic Modulation, Intra-tumoral Microbiome and Immunity in Early Onset Colorectal Cancer.
Ning Jin, Rebecca Hoyd, Ayse Selen Yilmaz, Jiangjiang Zhu, Yunzhou Liu, Nicholas C Denko

bioRxiv· April 2025

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Hypoxia promotes tumor immune evasion by suppressing MHC-I expression and antigen presentation.
Hala Estephan, Arun Tailor, Robert Parker, McKenzie Kreamer, Ioanna Papandreou, Nicholas C Denko

EMBO J· February 2025

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Comparative analysis of the tumor microbiome, molecular profiles, and immune cell abundances by HPV status in mucosal head and neck cancers and their impact on survival.
Rituraj Upadhyay, Aastha Dhakal, Caroline Wheeler, Rebecca Hoyd, Malvenderjit Jagjit Singh, Nicholas C Denko

Cancer Biol Ther· December 2024

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The Tumor Microbiome as a Predictor of Outcomes in Patients with Metastatic Melanoma Treated with Immune Checkpoint Inhibitors.
Caroline E Dravillas, Samuel S Coleman, Rebecca Hoyd, Griffin Caryotakis, Louis Denko, Nicholas Denko

Cancer Res Commun· August 2024

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Editorial: Hypoxia and angiogenesis in cancer.
Mohammad Malekan, Nicholas Denko, Lorenzo Mortara, Appu Rathinavelu, Mohammad Mahdi Parvizi

Front Pharmacol· August 2024

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The Tumor Microbiome Reacts to Hypoxia and Can Influence Response to Radiation Treatment in Colorectal Cancer.
Martin Benej, Rebecca Hoyd, McKenzie Kreamer, Caroline E Wheeler, Dennis J Grencewicz, Nicholas Denko

Cancer Res Commun· July 2024

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Hypoxic adaptation of mitochondria and its impact on tumor cell function.
Martin Benej, Ioanna Papandreou, Nicholas C Denko

Semin Cancer Biol· May 2024

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Nutrient scavenging-fueled growth in pancreatic cancer depends on caveolae-mediated endocytosis under nutrient-deprived conditions.
Adam R Wolfe, Tiantian Cui, Sooin Baie, Sergio Corrales-Guerrero, Amy Webb, Nicholas Denko

Sci Adv· March 2024

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A Bioinformatics Tool for Identifying Intratumoral Microbes from the ORIEN Dataset.
Cankun Wang, Anjun Ma, Yingjie Li, Megan E McNutt, Shiqi Zhang, Nicholas Denko, Louis Denko

Cancer Res Commun· February 2024

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Exogenous Sequences in Tumors and Immune Cells (Exotic): A Tool for Estimating the Microbe Abundances in Tumor RNA-seq Data.
Rebecca Hoyd, Caroline E Wheeler, YunZhou Liu, Malvenderjit S Jagjit Singh, Mitchell Muniak, Nicholas C Denko

Cancer Res Commun· November 2023

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The tumor microbiome as a predictor of outcomes in patients with metastatic melanoma treated with immune checkpoint inhibitors.
Caroline E Wheeler, Samuel S Coleman, Rebecca Hoyd, Louis Denko, Carlos H F Chan, Nicholas Denko

bioRxiv· May 2023

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A bioinformatics tool for identifying intratumoral microbes from the ORIEN dataset.
Cankun Wang, Anjun Ma, Megan E McNutt, Rebecca Hoyd, Caroline E Wheeler, Nicholas Denko, Louis Denko

bioRxiv· May 2023

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Unanticipated metabolic plasticity in response to chronic hypoxia.
Ioanna Papandreou, Martin Benej, Nicholas C Denko

Cell Metab· March 2023

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Association between Tumor Microbiome and Hypoxia across Anatomic Subsites of Head and Neck Cancers.
Aastha Dhakal, Rituraj Upadhyay, Caroline Wheeler, Rebecca Hoyd, Vidhya Karivedu, Nicholas C Denko

Int J Mol Sci· December 2022

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Aldehyde dehydrogenase 3A1 deficiency leads to mitochondrial dysfunction and impacts salivary gland stem cell phenotype.
Vignesh Viswanathan, Hongbin Cao, Julie Saiki, Dadi Jiang, Aaron Mattingly, Nicholas Denko

PNAS Nexus· May 2022

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Slit2-Mediated Metabolic Reprogramming in Bone Marrow-Derived Macrophages Enhances Antitumor Immunity.
Kirti Kaul, Martin Benej, Sanjay Mishra, Dinesh K Ahirwar, Marshleen Yadav, Nicholas C Denko

Front Immunol· February 2022

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Dynamic regulation of mitochondrial pyruvate metabolism is necessary for orthotopic pancreatic tumor growth.
Nancy P Echeverri Ruiz, Vijay Mohan, Jinghai Wu, Sabina Scott, McKenzie Kreamer, Nicholas C Denko

Cancer Metab· November 2021

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Effect of glucose concentration and cryopreservation on mitochondrial functions of bull spermatozoa and relationship with sire conception rate.
Christa R Moraes, Luis E Moraes, Bryan Blawut, Martin Benej, Ioanna Papandreou, Nicholas C Denko

Anim Reprod Sci· July 2021

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Lipid droplet storage promotes murine pancreatic tumor growth.
Jeremy J Grachan, Martin Kery, Amato J Giaccia, Nicholas C Denko, Ioanna Papandreou

Oncol Rep· April 2021

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Pharmacological Regulation of Tumor Hypoxia in Model Murine Tumors and Spontaneous Canine Tumors.
Martin Benej, Jinghai Wu, McKenzie Kreamer, Martin Kery, Sergio Corrales-Guerrero, Nicholas C Denko

Cancers (Basel)· April 2021

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