Publications by authors named "Nicholas Stephanopoulos"

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DNA Nanostructures for Rational Regulation of Cellular Organelles.
Petra Elblová, Judita Anthi, Minghui Liu, Mariia Lunova, Milan Jirsa, Nicholas Stephanopoulos

JACS Au· April 2025

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Geometrically constrained cytoskeletal reorganisation modulates DNA nanostructures uptake.
Petra Elblová, Hana Andělová, Mariia Lunova, Judita Anthi, Skylar J W Henry, Nicholas Stephanopoulos

J Mater Chem B· February 2025

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Structure-based discovery of hydrocarbon-stapled paxillin peptides that block FAK scaffolding in cancer.
Lauren Reyes, Lena Naser, Warren S Weiner, Darren Thifault, Erik Stahl, Nicholas Stephanopoulos

Nat Commun· February 2025

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Click-Chemistry-Enabled Functionalization of Cellulose Nanocrystals with Single-Stranded DNA for Directed Assembly.
Daria Bukharina, Katherine Cauffiel, Laura Mae Killingsworth, Justin A Brackenridge, Valeriia Poliukhova, Nicholas Stephanopoulos

ACS Biomater Sci Eng· October 2024

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Peptide-coated DNA nanostructures as a platform for control of lysosomal function in cells.
Petra Elblová, Mariia Lunova, Skylar J W Henry, Xinyi Tu, Alicia Calé, Nicholas Stephanopoulos

Chem Eng J· October 2024

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Templating Peptide Chemistry with Nucleic Acids: Toward Artificial Ribosomes, Cell-Specific Therapeutics, and Novel Protein-Mimetic Architectures.
Alexandra Novacek, Bryan Ugaz, Nicholas Stephanopoulos

Biomacromolecules· July 2024

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Construction of Reconfigurable and Polymorphic DNA Origami Assemblies with Coiled-Coil Patches and Patterns.
Teng Teng, Julio Bernal-Chanchavac, Nicholas Stephanopoulos, Carlos E Castro

Adv Sci (Weinh)· May 2024

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Inverse design of a pyrochlore lattice of DNA origami through model-driven experiments.
Hao Liu, Michael Matthies, John Russo, Lorenzo Rovigatti, Raghu Pradeep Narayanan, Nicholas Stephanopoulos

Science· May 2024

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High-Affinity Host-Guest Recognition for Efficient Assembly and Enzymatic Responsiveness of DNA Nanostructures.
Raghu Pradeep Narayanan, Abhay Prasad, Alex Buchberger, Lei Zou, Julio Bernal-Chanchavac, Nicholas Stephanopoulos

Small· March 2024

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Using dynamic biomaterials to study the temporal role of bioactive peptides during osteogenesis.
Fallon M Fumasi, Tara MacCulloch, Julio Bernal-Chanchavac, Nicholas Stephanopoulos, Julianne L Holloway

Biomater Adv· February 2024

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DNA-Nanostructure-Guided Assembly of Proteins into Programmable Shapes.
Qinyi Lu, Yang Xu, Erik Poppleton, Kun Zhou, Petr Sulc, Nicholas Stephanopoulos

Nano Lett· February 2024

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Site-Specific Arrangement and Structure Determination of Minor Groove Binding Molecules in Self-Assembled Three-Dimensional DNA Crystals.
Chad R Simmons, Alex Buchberger, Skylar J W Henry, Alexandra Novacek, Nour Eddine Fahmi, Nicholas Stephanopoulos

J Am Chem Soc· December 2023

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CytoDirect: A Nucleic Acid Nanodevice for Specific and Efficient Delivery of Functional Payloads to the Cytoplasm.
Lu Yu, Yang Xu, Md Al-Amin, Shuoxing Jiang, Matthew Sample, Nicholas Stephanopoulos

J Am Chem Soc· December 2023

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Site-specific arrangement and structure determination of minor groove binding molecules in self-assembled three-dimensional DNA crystals.
Chad R Simmons, Alex Buchberger, Skylar J W Henry, Alexandra Novacek, Nour Eddine Fahmi, Nicholas Stephanopoulos

bioRxiv· October 2023

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Self-Assembly of Hybrid Peptide-DNA Nanostructures using Homotrimeric Coiled-Coil/Nucleic Acid Building Blocks.
Alex Buchberger, Md Al-Amin, Chad R Simmons, Nicholas Stephanopoulos

Chembiochem· September 2023

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High-affinity binding to the SARS-CoV-2 spike trimer by a nanostructured, trivalent protein-DNA synthetic antibody.
Yang Xu, Rong Zheng, Abhay Prasad, Minghui Liu, Zijian Wan, Nicholas Stephanopoulos

bioRxiv· September 2023

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Calcium-triggered DNA-mediated membrane fusion in synthetic cells.
Yen-Yu Hsu, Samuel J Chen, Julio Bernal-Chanchavac, Bineet Sharma, Hossein Moghimianavval, Nicholas Stephanopoulos

Chem Commun (Camb)· July 2023

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Using dynamic biomaterials to study the temporal role of osteogenic growth peptide during osteogenesis.
Fallon M Fumasi, Tara MacCulloch, Julio Bernal-Chanchavac, Nicholas Stephanopoulos, Julianne L Holloway

bioRxiv· July 2023

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Calcium-triggered DNA-mediated membrane fusion in synthetic cells.
Yen-Yu Hsu, Samuel J Chen, Julio Bernal-Chanchavac, Bineet Sharma, Hossein Moghimianavval, Nicholas Stephanopoulos

bioRxiv· June 2023

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Atomistic Picture of Opening-Closing Dynamics of DNA Holliday Junction Obtained by Molecular Simulations.
Zhengyue Zhang, Jiří Šponer, Giovanni Bussi, Vojtěch Mlýnský, Petr Šulc, Nicholas Stephanopoulos

J Chem Inf Model· May 2023

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Coarse-Grained Simulations for the Characterization and Optimization of Hybrid Protein-DNA Nanostructures.
Raghu Pradeep Narayanan, Jonah Procyk, Purbasha Nandi, Abhay Prasad, Yang Xu, Nicholas Stephanopoulos

ACS Nano· September 2022

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Bioactive Fibronectin-III-DNA Origami Nanofibers Promote Cell Adhesion and Spreading.
Alex Buchberger, Kyle Riker, Julio Bernal-Chanchavac, Raghu Pradeep Narayanan, Chad R Simmons, Nicholas Stephanopoulos

ACS Appl Bio Mater· September 2022

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The interactions between DNA nanostructures and cells: A critical overview from a cell biology perspective.
Adam Frtús, Barbora Smolková, Mariia Uzhytchak, Mariia Lunova, Milan Jirsa, Nicholas Stephanopoulos

Acta Biomater· July 2022

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Uncovering temporospatial sensitive TBI targeting strategies via in vivo phage display.
Briana I Martinez, Gergey Alzaem Mousa, Kiera Fleck, Tara MacCulloch, Chris W Diehnelt, Nicholas Stephanopoulos

Sci Adv· July 2022

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The influence of Holliday junction sequence and dynamics on DNA crystal self-assembly.
Chad R Simmons, Tara MacCulloch, Miroslav Krepl, Michael Matthies, Alex Buchberger, Nicholas Stephanopoulos

Nat Commun· June 2022

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