Publications by authors named "Nobuo Niimura"

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Site-specific relaxation of peptide bond planarity induced by electrically attracted proton/deuteron observed by neutron crystallography.
Kaori Chiba, Takuro Matsui, Toshiyuki Chatake, Takashi Ohhara, Ichiro Tanaka, Nobuo Niimura

Protein Sci· October 2023

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Current status and near future plan of neutron protein crystallography at J-PARC.
Ichiro Tanaka, Toshiyuki Chatake, Satoru Fujiwara, Takaaki Hosoya, Katsuhiro Kusaka, Nobuo Niimura

Methods Enzymol· June 2021

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Status of the neutron time-of-flight single-crystal diffraction data-processing software STARGazer.
Naomine Yano, Taro Yamada, Takaaki Hosoya, Takashi Ohhara, Ichiro Tanaka, Nobuo Niimura

Acta Crystallogr D Struct Biol· November 2018

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Cryoprotectant-free high-pressure cooling and dynamic nuclear polarization for more sensitive detection of hydrogen in neutron protein crystallography.
Ichiro Tanaka, Naoya Komatsuzaki, Wen Xue Yue, Toshiyuki Chatake, Katsuhiro Kusaka, Nobuo Niimura

Acta Crystallogr D Struct Biol· August 2018

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Protonation State and Hydration of Bisphosphonate Bound to Farnesyl Pyrophosphate Synthase.
Takeshi Yokoyama, Mineyuki Mizuguchi, Andreas Ostermann, Katsuhiro Kusaka, Nobuo Niimura

J Med Chem· September 2015

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"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Akihiko Nakamura, Takuya Ishida, Katsuhiro Kusaka, Taro Yamada, Shinya Fushinobu, Nobuo Niimura

Sci Adv· August 2015

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Insights into the Proton Transfer Mechanism of a Bilin Reductase PcyA Following Neutron Crystallography.
Masaki Unno, Kumiko Ishikawa-Suto, Katsuhiro Kusaka, Taro Tamada, Yoshinori Hagiwara, Nobuo Niimura

J Am Chem Soc· April 2015

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Physical properties, structure, and shape of radioactive Cs from the Fukushima Daiichi Nuclear Power Plant accident derived from soil, bamboo and shiitake mushroom measurements.
Nobuo Niimura, Kenji Kikuchi, Ninh Duc Tuyen, Masakazu Komatsuzaki, Yoshinobu Motohashi

J Environ Radioact· January 2015

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Crystallization and preliminary neutron diffraction experiment of human farnesyl pyrophosphate synthase complexed with risedronate.
Takeshi Yokoyama, Andreas Ostermann, Mineyuki Mizuguchi, Nobuo Niimura, Tobias E Schrader

Acta Crystallogr F Struct Biol Commun· April 2014

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Hydrogen-bond network and pH sensitivity in human transthyretin.
Takeshi Yokoyama, Mineyuki Mizuguchi, Yuko Nabeshima, Katsuhiro Kusaka, Taro Yamada, Nobuo Niimura

J Synchrotron Radiat· November 2013

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Phase-diagram-guided method for growth of a large crystal of glycoside hydrolase family 45 inverting cellulase suitable for neutron structural analysis.
Akihiko Nakamura, Takuya Ishida, Shinya Fushinobu, Katsuhiro Kusaka, Ichiro Tanaka, Nobuo Niimura

J Synchrotron Radiat· November 2013

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Fundamental studies for the proton polarization technique in neutron protein crystallography.
Ichiro Tanaka, Katsuhiro Kusaka, Toshiyuki Chatake, Nobuo Niimura

J Synchrotron Radiat· November 2013

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Evaluation of performance for IBARAKI biological crystal diffractometer iBIX with new detectors.
Katsuhiro Kusaka, Takaaki Hosoya, Taro Yamada, Katsuaki Tomoyori, Takashi Ohhara, Nobuo Niimura

J Synchrotron Radiat· November 2013

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Neutron and X-ray crystallographic analysis of the human α-thrombin-bivalirudin complex at pD 5.0: protonation states and hydration structure of the enzyme-product complex.
Taro Yamada, Kazuo Kurihara, Yuki Ohnishi, Taro Tamada, Katsuaki Tomoyori, Nobuo Niimura

Biochim Biophys Acta· August 2013

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Neutron and X-ray crystallographic analysis of Achromobacter protease I at pD 8.0: protonation states and hydration structure in the free-form.
Yuki Ohnishi, Taro Yamada, Kazuo Kurihara, Ichiro Tanaka, Fumio Sakiyama, Nobuo Niimura

Biochim Biophys Acta· August 2013

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Quaternary structure, aggregation and cytotoxicity of transthyretin.
Mineyuki Mizuguchi, Takeshi Yokoyama, Yuko Nabeshima, Keiichi Kawano, Ichiro Tanaka, Nobuo Niimura

Amyloid· June 2012

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Hydrogen-bond network and pH sensitivity in transthyretin: Neutron crystal structure of human transthyretin.
Takeshi Yokoyama, Mineyuki Mizuguchi, Yuko Nabeshima, Katsuhiro Kusaka, Taro Yamada, Nobuo Niimura

J Struct Biol· February 2012

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X-ray and neutron protein crystallographic analysis of the trypsin-BPTI complex.
Kenji Kawamura, Taro Yamada, Kazuo Kurihara, Taro Tamada, Ryota Kuroki, Nobuo Niimura

Acta Crystallogr D Biol Crystallogr· February 2011

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Neutron structure analysis using the IBARAKI biological crystal diffractometer (iBIX) at J-PARC.
Ichiro Tanaka, Katsuhiro Kusaka, Takaaki Hosoya, Nobuo Niimura, Takashi Ohhara

Acta Crystallogr D Biol Crystallogr· November 2010

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[Beginning of use of a new biological neutron diffractometer (iBIX) in J-PARC].
Ichiro Tanaka, Katsuhiro Kusaka, Takaaki Hosoya, Takashi Ohhara, Kazuo Kurihara, Nobuo Niimura

Yakugaku Zasshi· May 2010

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A neutron crystallographic analysis of T6 porcine insulin at 2.1 A resolution.
Wakari Iwai, Taro Yamada, Kazuo Kurihara, Yuki Ohnishi, Yoichiro Kobayashi, Nobuo Niimura

Acta Crystallogr D Biol Crystallogr· October 2009

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A neutron crystallographic analysis of phosphate-free ribonuclease A at 1.7 A resolution.
Daichi Yagi, Taro Yamada, Kazuo Kurihara, Yuki Ohnishi, Masahiro Yamashita, Nobuo Niimura

Acta Crystallogr D Biol Crystallogr· September 2009

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To flip or not to flip? Assessing the inversion barrier of the tetraphenylene framework with enantiopure 2,15-dideuteriotetraphenylene and 2,7-dimethyltetraphenylene.
Hui Huang, Timothy Stewart, Matthias Gutmann, Takashi Ohhara, Nobuo Niimura

J Org Chem· January 2009

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Low-barrier hydrogen bond in photoactive yellow protein.
Shigeo Yamaguchi, Hironari Kamikubo, Kazuo Kurihara, Ryota Kuroki, Nobuo Niimura

Proc Natl Acad Sci U S A· January 2009

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An abnormal pK(a) value of internal histidine of the insulin molecule revealed by neutron crystallographic analysis.
Takuya Ishikawa, Toshiyuki Chatake, Yukio Morimoto, Mitsuru Maeda, Kazuo Kurihara, Nobuo Niimura

Biochem Biophys Res Commun· November 2008

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