Publications by authors named "Patrick Markt"

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Polymorphism in Tmem132d regulates expression and anxiety-related behavior through binding of RNA polymerase II complex.
Roshan R Naik, Sergey V Sotnikov, Rebekka P Diepold, Stella Iurato, Patrick O Markt

Transl Psychiatry· January 2018

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A combinatorial screen of the CLOUD uncovers a synergy targeting the androgen receptor.
Marco P Licciardello, Anna Ringler, Patrick Markt, Freya Klepsch, Charles-Hugues Lardeau

Nat Chem Biol· July 2017

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Real-time imaging of amygdalar network dynamics in vitro reveals a neurophysiological link to behavior in a mouse model of extremes in trait anxiety.
Charilaos Avrabos, Sergey V Sotnikov, Julien Dine, Patrick O Markt, Florian Holsboer

J Neurosci· October 2013

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Identification of HIV-1 reverse transcriptase dual inhibitors by a combined shape-, 2D-fingerprint- and pharmacophore-based virtual screening approach.
Simona Distinto, Francesca Esposito, Johannes Kirchmair, M Cristina Cardia, Marco Gaspari, Patrick Markt

Eur J Med Chem· April 2012

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Synthesis and biological assessment of novel 2-thiazolylhydrazones and computational analysis of their recognition by monoamine oxidase B.
Simona Distinto, Matilde Yáñez, Stefano Alcaro, M Cristina Cardia, Marco Gaspari, Patrick Markt

Eur J Med Chem· February 2012

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Pharmacophore-based discovery of FXR agonists. Part I: Model development and experimental validation.
Daniela Schuster, Patrick Markt, Ulrike Grienke, Judit Mihaly-Bison, Markus Binder

Bioorg Med Chem· December 2011

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Leoligin, the major lignan from Edelweiss, activates cholesteryl ester transfer protein.
Kristina Duwensee, Stefan Schwaiger, Ivan Tancevski, Kathrin Eller, Miranda van Eck, Patrick Markt

Atherosclerosis· November 2011

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Identification of chemically diverse, novel inhibitors of 17β-hydroxysteroid dehydrogenase type 3 and 5 by pharmacophore-based virtual screening.
Daniela Schuster, Dorota Kowalik, Johannes Kirchmair, Christian Laggner, Patrick Markt

J Steroid Biochem Mol Biol· May 2011

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Alizarine derivatives as new dual inhibitors of the HIV-1 reverse transcriptase-associated DNA polymerase and RNase H activities effective also on the RNase H activity of non-nucleoside resistant reverse transcriptases.
Francesca Esposito, Tatyana Kharlamova, Simona Distinto, Luca Zinzula, Yung-Chi Cheng, Patrick Markt

FEBS J· May 2011

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Pharmacophore modeling and virtual screening for novel acidic inhibitors of microsomal prostaglandin E₂ synthase-1 (mPGES-1).
Birgit Waltenberger, Katja Wiechmann, Julia Bauer, Patrick Markt, Stefan M Noha

J Med Chem· May 2011

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Development of anti-viral agents using molecular modeling and virtual screening techniques.
Johannes Kirchmair, Simona Distinto, Klaus Roman Liedl, Patrick Markt, Judith Maria Rollinger

Infect Disord Drug Targets· February 2011

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Discovery of a novel IKK-β inhibitor by ligand-based virtual screening techniques.
Stefan M Noha, Atanas G Atanasov, Daniela Schuster, Patrick Markt, Nanang Fakhrudin

Bioorg Med Chem Lett· January 2011

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Epidermis-type lipoxygenase 3 regulates adipocyte differentiation and peroxisome proliferator-activated receptor gamma activity.
Philip Hallenborg, Claus Jørgensen, Rasmus K Petersen, Søren Feddersen, Pedro Araujo, Patrick Markt

Mol Cell Biol· August 2010

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Characterization of new PPARgamma agonists: benzimidazole derivatives-importance of positions 5 and 6, and computational studies on the binding mode.
Matthias Goebel, Gerhard Wolber, Patrick Markt, Bart Staels, Thomas Unger

Bioorg Med Chem· August 2010

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One concept, three implementations of 3D pharmacophore-based virtual screening: distinct coverage of chemical search space.
Gudrun M Spitzer, Mathias Heiss, Martina Mangold, Patrick Markt, Johannes Kirchmair

J Chem Inf Model· July 2010

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Computer-aided discovery, validation, and mechanistic characterization of novel neolignan activators of peroxisome proliferator-activated receptor gamma.
Nanang Fakhrudin, Angela Ladurner, Atanas G Atanasov, Elke H Heiss, Lisa Baumgartner, Patrick Markt

Mol Pharmacol· April 2010

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Predicting Cyclooxygenase Inhibition by Three-Dimensional Pharmacophoric Profiling. Part I: Model Generation, Validation and Applicability in Ethnopharmacology.
Daniela Schuster, Birgit Waltenberger, Johannes Kirchmair, Simona Distinto, Patrick Markt

Mol Inform· January 2010

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Critical comparison of virtual screening methods against the MUV data set.
Pekka Tiikkainen, Patrick Markt, Gerhard Wolber, Johannes Kirchmair, Simona Distinto

J Chem Inf Model· October 2009

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Hydrogen-bonding patterns of minor groove-binder-DNA complexes reveal criteria for discovery of new scaffolds.
Gudrun M Spitzer, Bernd Wellenzohn, Patrick Markt, Johannes Kirchmair, Thierry Langer

J Chem Inf Model· April 2009

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How to optimize shape-based virtual screening: choosing the right query and including chemical information.
Johannes Kirchmair, Simona Distinto, Patrick Markt, Daniela Schuster, Gudrun M Spitzer

J Chem Inf Model· March 2009

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In silico target fishing for rationalized ligand discovery exemplified on constituents of Ruta graveolens.
Judith M Rollinger, Daniela Schuster, Birgit Danzl, Stefan Schwaiger, Patrick Markt

Planta Med· February 2009

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Discovery of novel CB2 receptor ligands by a pharmacophore-based virtual screening workflow.
Patrick Markt, Clemens Feldmann, Judith Maria Rollinger, Stefan Raduner, Daniela Schuster

J Med Chem· January 2009

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Sequence-specific positions of water molecules at the interface between DNA and minor groove binders.
Gudrun M Spitzer, Julian E Fuchs, Patrick Markt, Johannes Kirchmair, Bernd Wellenzohn

Chemphyschem· December 2008

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The Protein Data Bank (PDB), its related services and software tools as key components for in silico guided drug discovery.
Johannes Kirchmair, Patrick Markt, Simona Distinto, Daniela Schuster, Gudrun M Spitzer

J Med Chem· November 2008

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Discovery of novel PPAR ligands by a virtual screening approach based on pharmacophore modeling, 3D shape, and electrostatic similarity screening.
Patrick Markt, Rasmus K Petersen, Esben N Flindt, Karsten Kristiansen, Johannes Kirchmair

J Med Chem· October 2008

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