Publications by authors named "Pavankumar Videm"

Claim this Profile
G
Galaxy single-cell & spatial omics community update: Navigating new frontiers in 2025.
Marisa Loach, Amirhossein Naghsh Nilchi, Diana Chiang, Morgan Howells, Florian Heyl, Pavankumar Videm

Cell Genom· October 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
G
Galaxy as a gateway to bioinformatics: Multi-Interface Galaxy Hands-on Training Suite (MIGHTS) for scRNA-seq.
Camila L Goclowski, Julia Jakiela, Tyler Collins, Saskia Hiltemann, Morgan Howells, Pavankumar Videm

Gigascience· January 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
CheRRI-Accurate classification of the biological relevance of putative RNA-RNA interaction sites.
Teresa Müller, Stefan Mautner, Pavankumar Videm, Florian Eggenhofer, Martin Raden

Gigascience· January 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
ChiRA: an integrated framework for chimeric read analysis from RNA-RNA interactome and RNA structurome data.
Pavankumar Videm, Anup Kumar, Oleg Zharkov, Björn Andreas Grüning, Rolf Backofen

Gigascience· January 2021

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
F
FOXG1 Regulates PRKAR2B Transcriptionally and Posttranscriptionally via miR200 in the Adult Hippocampus.
Stefan C Weise, Ganeshkumar Arumugam, Alejandro Villarreal, Pavankumar Videm, Stefanie Heidrich

Mol Neurobiol· July 2019

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
T
The RNA workbench 2.0: next generation RNA data analysis.
Jörg Fallmann, Pavankumar Videm, Andrea Bagnacani, Bérénice Batut, Maria A Doyle

Nucleic Acids Res· July 2019

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
D
DOT1L promotes progenitor proliferation and primes neuronal layer identity in the developing cerebral cortex.
Henriette Franz, Alejandro Villarreal, Stefanie Heidrich, Pavankumar Videm, Fabian Kilpert

Nucleic Acids Res· January 2019

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
Community-Driven Data Analysis Training for Biology.
Bérénice Batut, Saskia Hiltemann, Andrea Bagnacani, Dannon Baker, Vivek Bhardwaj, Pavankumar Videm

Cell Syst· June 2018

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
T
The RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy.
Björn A Grüning, Jörg Fallmann, Dilmurat Yusuf, Sebastian Will, Anika Erxleben, Pavankumar Videm

Nucleic Acids Res· July 2017

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
B
BlockClust: efficient clustering and classification of non-coding RNAs from short read RNA-seq profiles.
Pavankumar Videm, Dominic Rose, Fabrizio Costa, Rolf Backofen

Bioinformatics· June 2014

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
Automated peptide mapping and protein-topographical annotation of proteomics data.
Pavankumar Videm, Deepika Gunasekaran, Bernd Schröder, Bettina Mayer, Martin L Biniossek

BMC Bioinformatics· June 2014

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
MOF-associated complexes ensure stem cell identity and Xist repression.
Tomasz Chelmicki, Friederike Dündar, Matthew James Turley, Tasneem Khanam, Tugce Aktas, Pavankumar Videm

Elife· May 2014

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis