Publications by authors named "Peter Castaldi"

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Nasal epithelium and blood transcriptomic signatures associations with smoking and exacerbations.
Vickram Tejwani, Arunangshu Sarkar, Claire J Guo, Satria Sajuthi, Peter Castaldi

Eur Respir J· December 2025

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Molecular determinants of lung function decline: a multi-level analysis of gene expression.
Zaid W Elhusseini, Omar Rafique, Min Hyung Ryu, Peter Castaldi, Don D Sin

Respir Res· December 2025

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A statistical physics approach to integrating multi-omics data for disease-module detection.
Xu-Wen Wang, Min Hyung Ryu, Michael H Cho, Peter Castaldi, Craig P Hersh

Cell Rep Methods· October 2025

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Frequency of cannabis use and symptoms of anxiety and depression: a cross-sectional analysis of the Colorado cannabis users health cohort.
Christine M Steeger, Poojashree Tandukar, Karin F Hoth, Mark Aloia, Fred Wamboldt, Peter Castaldi

J Cannabis Res· October 2025

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Clearing the air: Empowering high-risk adults with digital tools for smoking cessation and lung cancer screening adoption.
Mary E Cooley, Sun S Kim, Niya Xiong, Hillary Heiling, Emanuele Mazzola, Peter J Castaldi

Lung Cancer· August 2025

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Overlap between COPD genetic association results and transcriptional quantitative trait loci.
Aabida Saferali, Wonji Kim, Robert P Chase, , Christopher Vollmers, Peter J Castaldi

HGG Adv· August 2025

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Molecular Determinants of Lung Function Decline: A Multi- Level Analysis of Gene Expression.
Zaid W Elhusseini, Omar Rafique, Min Hyung Ryu, Peter Castaldi, Don D Sin

Res Sq· August 2025

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Proteomic biomarkers of emphysema-predominant and non-emphysema-predominant chronic obstructive pulmonary disease.
Yu-Hang Zhang, Peter J Castaldi, Russell P Bowler, Katherine A Pratte, Gregory L Kinney

EBioMedicine· July 2025

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Knowledge, Interest and Recommendations for Receipt of Polygenetic Risk Scores Among Adults Who Smoked Long-Term: A Descriptive Qualitative Analysis.
Meghan Underhill, Hayley Dunnack Yackel, Manan M Nayak, Andrea Borondy-Kitts, Sun S Kim, Peter J Castaldi

Psychooncology· June 2025

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Omic Risk Scores are Associated with COPD-related Traits Across Three Cohorts.
Iain R Konigsberg, Luciana B Vargas, Katherine A Pratte, Daniel E Guzman, Tess D Pottinger, Peter J Castaldi

medRxiv· June 2025

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Deep Learning of Suboptimal Spirometry to Predict Respiratory Outcomes and Mortality.
Davin Hill, Max Torop, Aria Masoomi, Peter J Castaldi, Edwin K Silverman

Res Sq· June 2025

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A Pilot Study on the Impact of Vaping on Adolescent Lung Function and Nasal Epithelial Gene Expression.
Sarah Commodore, Jonathan Hawkins, Cheyret Wood, Cuining Liu, Russell P Bowler, Peter Castaldi

Am J Respir Cell Mol Biol· May 2025

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B-cell immune repertoire sequencing in tobacco cigarette smoking, vaping, and chronic obstructive pulmonary disease in the COPDGene cohort.
Matthew Moll, Zhonghui Xu, Adel Boueiz, Min Hyung Ryu, Edwin K Silverman, Peter J Castaldi

Front Immunol· May 2025

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miRNA-mRNA network analysis identifies PAX5 as a potential regulator of adaptive immune response in COPD.
Michele Gentili, Margherita De Marzio, Brian Hobbs, Craig P Hersh, Min Hyung Ryu, Peter Castaldi

bioRxiv· May 2025

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HHIP protein interactions in lung cells provide insight into COPD pathogenesis.
Dávid Deritei, Hiroyuki Inuzuka, Peter J Castaldi, Jeong Hyun Yun, Zhonghui Xu

Hum Mol Genet· April 2025

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Characterisation of a COPD-associated nephronectin () functional splicing genetic variant in human lung tissue long-read sequencing.
Aabida Saferali, Anastacia N Wienecke, Zhonghui Xu, Tao Liu, Gloria M Sheynkman, Peter J Castaldi

Eur Respir J· April 2025

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Biosurfer for systematic tracking of regulatory mechanisms leading to protein isoform diversity.
Mayank Murali, Jamie Saquing, Senbao Lu, Ziyang Gao, Emily F Watts, Peter J Castaldi

Genome Res· April 2025

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A generalized higher-order correlation analysis framework for multi-omics network inference.
Weixuan Liu, Katherine A Pratte, Peter J Castaldi, Craig Hersh, Russell P Bowler

PLoS Comput Biol· April 2025

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Identifying chronic obstructive pulmonary disease subtypes using multi-trait genetics.
Andrey Ziyatdinov, Brian D Hobbs, Samir Kanaan-Izquierdo, Matthew Moll, Phuwanat Sakornsakolpat, Peter J Castaldi

EBioMedicine· March 2025

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Cross-cohort analysis of expression and splicing quantitative trait loci in TOPMed.
Peter Orchard, Thomas W Blackwell, Linda Kachuri, Peter J Castaldi, Michael H Cho

medRxiv· February 2025

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Polygenic and transcriptional risk scores identify chronic obstructive pulmonary disease subtypes in the COPDGene and ECLIPSE cohort studies.
Matthew Moll, Julian Hecker, John Platig, Jingzhou Zhang, Auyon J Ghosh, Peter J Castaldi

EBioMedicine· December 2024

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Distinct physiological, transcriptomic, and imaging characteristics of asthma-COPD overlap compared to asthma and COPD in smokers.
Vrushali D Fangal, Aabida Saferali, Peter J Castaldi, Craig P Hersh, Scott T Weiss

EBioMedicine· December 2024

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Leukemia inhibitory factor (LIF) receptor amplifies pathogenic activation of fibroblasts in lung fibrosis.
Hung N Nguyen, Yunju Jeong, Yunhye Kim, Mari Kamiya, Yaunghyun Kim, Peter J Castaldi

Proc Natl Acad Sci U S A· December 2024

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Computational deconvolution of cell type-specific gene expression in COPD and IPF lungs reveals disease severity associations.
Min Hyung Ryu, Jeong H Yun, Kangjin Kim, Michele Gentili, Auyon Ghosh, Peter J Castaldi

BMC Genomics· December 2024

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