Publications by authors named "Philip Fowler"

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Enhancement of midwives' and child healthcare nurses' attitudes towards the WHO's recommendations following breastfeeding training: A quasi-experimental study.
Ingrid Blixt, Philip Fowler, Ove Axelsson, Eva-Lotta Funkquist

Sex Reprod Healthc· December 2025

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Evaluating 12 automated, whole-genome sequencing analysis pipelines for Mycobacterium tuberculosis complex: a comparative study.
Ruan Spies, Derrick W Crook, Timothy E A Peto, Philip W Fowler, Robert Turner

Lancet Microbe· December 2025

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Characterizing the performance of an antibiotic resistance prediction tool, gnomonicus, using a diverse test set of 2,663 samples.
Jeremy Westhead, Catriona S Baker, Marc Brouard, Matthew Colpus, Bede Constantinides, Philip W Fowler

Microb Genom· December 2025

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Rapid, accurate, and reproducible prediction of resistance to antituberculars.
Xibei Zhang, Shunzhou Wan, Agastya P Bhati, Philip W Fowler, Peter V Coveney

mSphere· October 2025

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Subpopulations in clinical samples of can give rise to rifampicin resistance and shed light on how resistance is acquired.
Viktoria M Brunner, Philip W Fowler

JAC Antimicrob Resist· October 2025

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An improved catalogue for whole-genome sequencing prediction of bedaquiline resistance in using a reproducible algorithmic approach.
Dylan Adlard, Lavania Joseph, Hermione Webster, Ailva O'Reilly, Jeffrey Knaggs, Philip W Fowler

Microb Genom· June 2025

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Deep learning-based framework for Mycobacterium tuberculosis bacterial growth detection for antimicrobial susceptibility testing.
Hoang-Anh T Vo, Sang Nguyen, Ai-Quynh T Tran, Han Nguyen, Hai Bich Ho, Philip W Fowler

Comput Struct Biotechnol J· May 2025

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Predicting rifampicin resistance in using machine learning informed by protein structural and chemical features.
Charlotte I Lynch, Dylan Adlard, Philip W Fowler

ERJ Open Res· May 2025

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Addressing pandemic-wide systematic errors in the SARS-CoV-2 phylogeny.
Martin Hunt, Angie S Hinrichs, Daniel Anderson, Lily Karim, Bethany L Dearlove, Philip W Fowler

bioRxiv· November 2024

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Infection Inspection: using the power of citizen science for image-based prediction of antibiotic resistance in Escherichia coli treated with ciprofloxacin.
Alison Farrar, Conor Feehily, Piers Turner, Alexander Zagajewski, Stelios Chatzimichail, Philip W Fowler

Sci Rep· August 2024

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Prediction of pyrazinamide resistance in using structure-based machine-learning approaches.
Joshua J Carter, Timothy M Walker, A Sarah Walker, Michael G Whitfield, Glenn P Morlock, Philip W Fowler

JAC Antimicrob Resist· April 2024

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Compensatory mutations are associated with increased growth in resistant clinical samples of .
Viktoria M Brunner, Philip W Fowler

Microb Genom· February 2024

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Discordance between different bioinformatic methods for identifying resistance genes from short-read genomic data, with a focus on .
Timothy J Davies, Jeremy Swann, Anna E Sheppard, Hayleigh Pickford, Samuel Lipworth, Philip W Fowler

Microb Genom· December 2023

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Bedaquiline and clofazimine resistance in Mycobacterium tuberculosis: an in-vitro and in-silico data analysis.
Lindsay Sonnenkalb, Joshua James Carter, Andrea Spitaleri, Zamin Iqbal, Martin Hunt, Philip William Fowler

Lancet Microbe· May 2023

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Inclusion of minor alleles improves catalogue-based prediction of fluoroquinolone resistance in .
Alice E Brankin, Philip W Fowler

JAC Antimicrob Resist· April 2023

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Oral Contraceptives, Hormone Replacement Therapy, and Stroke Risk.
Therese Johansson, Philip Fowler, Weronica E Ek, Alkistis Skalkidou, Torgny Karlsson

Stroke· October 2022

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Predicting antibiotic resistance in complex protein targets using alchemical free energy methods.
Alice E Brankin, Philip W Fowler

J Comput Chem· October 2022

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ReadItAndKeep: rapid decontamination of SARS-CoV-2 sequencing reads.
Martin Hunt, Jeremy Swann, Bede Constantinides, Philip W Fowler, Zamin Iqbal

Bioinformatics· June 2022

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A crowd of BashTheBug volunteers reproducibly and accurately measure the minimum inhibitory concentrations of 13 antitubercular drugs from photographs of 96-well broth microdilution plates.
Philip W Fowler, Carla Wright, Helen Spiers, Tingting Zhu, Elisabeth M L Baeten

Elife· May 2022

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The 2021 WHO catalogue of complex mutations associated with drug resistance: A genotypic analysis.
Timothy M Walker, Paolo Miotto, Claudio U Köser, Philip W Fowler, Jeff Knaggs

Lancet Microbe· April 2022

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Productivity in relation to organization of a surgical department: a retrospective observational study.
Johan Eriksson, Philip Fowler, Micael Appelblad, Lena Lindholm, Malin Sund

BMC Surg· March 2022

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Cryo-EM structure and resistance landscape of M. tuberculosis MmpL3: An emergent therapeutic target.
Oliver Adams, Justin C Deme, Joanne L Parker, , Philip W Fowler

Structure· October 2021

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How quickly can we predict trimethoprim resistance using alchemical free energy methods?
Philip W Fowler

Interface Focus· December 2020

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Differential occupational risks to healthcare workers from SARS-CoV-2 observed during a prospective observational study.
David W Eyre, Sheila F Lumley, Denise O'Donnell, Mark Campbell, Elizabeth Sims, Philip W Fowler

Elife· August 2020

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Reconciling the Potentially Irreconcilable? Genotypic and Phenotypic Amoxicillin-Clavulanate Resistance in .
Timothy J Davies, Nicole Stoesser, Anna E Sheppard, Manal Abuoun, Philip Fowler

Antimicrob Agents Chemother· May 2020

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