Publications by authors named "Po Yi Ho"

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Nutrient competition predicts gut microbiome restructuring under drug perturbations.
Handuo Shi, Daniel P Newton, Taylor H Nguyen, Sylvie Estrela, Juan Sanchez, Po-Yi Ho

Cell· November 2025

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Challenges in interpreting functional redundancy and quantifying functional selection in microbial communities.
Po-Yi Ho, Kerwyn Casey Huang

Cell Syst· August 2025

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Assembly of stool-derived bacterial communities follows "early-bird" resource utilization dynamics.
Andrés Aranda-Díaz, Lisa Willis, Taylor H Nguyen, Po-Yi Ho, Jean Vila, Tani Thomsen

Cell Syst· April 2025

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Nutrient competition predicts gut microbiome restructuring under drug perturbations.
Handuo Shi, Daniel P Newton, Taylor H Nguyen, Sylvie Estrela, Juan Sanchez, Po-Yi Ho

bioRxiv· August 2024

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Resource competition predicts assembly of gut bacterial communities in vitro.
Po-Yi Ho, Taylor H Nguyen, Juan M Sanchez, Brian C DeFelice, Kerwyn Casey Huang

Nat Microbiol· April 2024

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Challenges in quantifying functional redundancy and selection in microbial communities.
Po-Yi Ho, Kerwyn Casey Huang

bioRxiv· March 2024

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Modulation of antibiotic effects on microbial communities by resource competition.
Daniel P Newton, Po-Yi Ho, Kerwyn Casey Huang

Nat Commun· April 2023

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Assembly of gut-derived bacterial communities follows "early-bird" resource utilization dynamics.
Andrés Aranda-Díaz, Lisa Willis, Taylor H Nguyen, Po-Yi Ho, Jean Vila, Tani Thomsen

bioRxiv· January 2023

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Design, construction, and in vivo augmentation of a complex gut microbiome.
Alice G Cheng, Po-Yi Ho, Andrés Aranda-Díaz, Sunit Jain, Feiqiao B Yu, Anthony L Shiver

Cell· September 2022

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The Tabula Sapiens: A multiple-organ, single-cell transcriptomic atlas of humans.

Science· May 2022

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Competition for fluctuating resources reproduces statistics of species abundance over time across wide-ranging microbiotas.
Po-Yi Ho, Benjamin H Good, Kerwyn Casey Huang

Elife· April 2022

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Combining CD47 blockade with trastuzumab eliminates HER2-positive breast cancer cells and overcomes trastuzumab tolerance.
Rosalynd Upton, Allison Banuelos, Dongdong Feng, Tanuka Biswas, Kevin Kao, Po Yi Ho

Proc Natl Acad Sci U S A· July 2021

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Hepatitis A Virus Infections Among Men Who Have Sex with Men - Eight U.S. States, 2017-2018.
Monique A Foster, Megan G Hofmeister, Justin P Albertson, Kerri B Brown, Alexis W Burakoff, Po-Yi Ho

MMWR Morb Mortal Wkly Rep· June 2021

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A Mechanistic Model of the Regulation of Division Timing by the Circadian Clock in Cyanobacteria.
Po-Yi Ho, Bruno M C Martins, Ariel Amir

Biophys J· June 2020

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TiO nanoparticles generate superoxide and alter gene expression in human lung cells.
Dhanya T Jayaram, Ashwath Kumar, Linda E Kippner, Po-Yi Ho, Melissa L Kemp, Yuhong Fan

RSC Adv· August 2019

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Deferiprone: Pan-selective Histone Lysine Demethylase Inhibition Activity and Structure Activity Relationship Study.
Verjine Khodaverdian, Subhasish Tapadar, Ian A MacDonald, Yuan Xu, Po-Yi Ho, Yuhong Fan

Sci Rep· March 2019

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Modeling Cell Size Regulation: From Single-Cell-Level Statistics to Molecular Mechanisms and Population-Level Effects.
Po-Yi Ho, Jie Lin, Ariel Amir

Annu Rev Biophys· May 2018

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Archaeal cells share common size control with bacteria despite noisier growth and division.
Ye-Jin Eun, Po-Yi Ho, Minjeong Kim, Salvatore LaRussa, Lydia Robert

Nat Microbiol· February 2018

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Engagement of MHC class I by the inhibitory receptor LILRB1 suppresses macrophages and is a target of cancer immunotherapy.
Amira A Barkal, Kipp Weiskopf, Kevin S Kao, Sydney R Gordon, Benyamin Rosental, Po Yi Ho

Nat Immunol· January 2018

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A Parallel Adder Coordinates Mycobacterial Cell-Cycle Progression and Cell-Size Homeostasis in the Context of Asymmetric Growth and Organization.
Michelle M Logsdon, Po-Yi Ho, Kadamba Papavinasasundaram, Kirill Richardson, Murat Cokol

Curr Biol· November 2017

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Details Matter: Noise and Model Structure Set the Relationship between Cell Size and Cell Cycle Timing.
Felix Barber, Po-Yi Ho, Andrew W Murray, Ariel Amir

Front Cell Dev Biol· November 2017

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Interrogating the Escherichia coli cell cycle by cell dimension perturbations.
Hai Zheng, Po-Yi Ho, Meiling Jiang, Bin Tang, Weirong Liu

Proc Natl Acad Sci U S A· December 2016

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Hematopoietic stem cell transplantation in immunocompetent hosts without radiation or chemotherapy.
Akanksha Chhabra, Aaron M Ring, Kipp Weiskopf, Peter John Schnorr, Sydney Gordon, Po Yi Ho

Sci Transl Med· August 2016

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Simultaneous regulation of cell size and chromosome replication in bacteria.
Po-Yi Ho, Ariel Amir

Front Microbiol· July 2015

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Macrophages eat cancer cells using their own calreticulin as a guide: roles of TLR and Btk.
Mingye Feng, James Y Chen, Rachel Weissman-Tsukamoto, Jens-Peter Volkmer, Po Yi Ho

Proc Natl Acad Sci U S A· February 2015

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