Publications by authors named "Poudel Suresh"

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Membrane receptors cluster phosphatidylserine to activate LC3-associated phagocytosis.
Emilio Boada-Romero, Clifford S Guy, Gustavo Palacios, Luigi Mari, Suresh Poudel

Nat Cell Biol· October 2025

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Integrated Longitudinal Transcriptomic and Proteomic Analysis of the Murine Lung Response to Influenza A Virus.
Tim Flerlage, David F Boyd, Brandi Clark, Nikhil G Marudai, Shally Saini, Suresh Poudel

Am J Respir Cell Mol Biol· October 2025

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Proteome solubility is differentially reshaped by thermal stress and regulators of ubiquitination.
Liam C Hunt, Anna Stephan, Suresh Poudel, Kaiwen Yu, Kanisha Kavdia

J Biol Chem· September 2025

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Early methionine availability attenuates T cell exhaustion.
Piyush Sharma, Ao Guo, Suresh Poudel, Emilio Boada-Romero, Katherine C Verbist

Nat Immunol· August 2025

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Pan-PTM profiling identifies post-translational modifications associated with exceptional longevity and preservation of skeletal muscle function in Drosophila.
Suresh Poudel, Chia-Lung Chuang, Him K Shrestha, Fabio Demontis

NPJ Aging· March 2025

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JUMPlib: Integrative Search Tool Combining Fragment Ion Indexing with Comprehensive TMT Spectral Libraries.
Suresh Poudel, Zuo-Fei Yuan, Yingxue Fu, Long Wu, Him Shrestha

J Proteome Res· February 2025

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Human and mouse proteomics reveals the shared pathways in Alzheimer's disease and delayed protein turnover in the amyloidome.
Jay M Yarbro, Xian Han, Abhijit Dasgupta, Ka Yang, Danting Liu, Suresh Poudel

Nat Commun· February 2025

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Serum Proteins Predict Treatment-Related Cardiomyopathy Among Survivors of Childhood Cancer.
Suresh Poudel, Him Shrestha, Yue Pan, Qian Li, Kendrick Li

JACC CardioOncol· January 2025

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Genetic regulation of human brain proteome reveals proteins implicated in psychiatric disorders.
Jie Luo, Ling Li, Mingming Niu, Dehui Kong, Yi Jiang, Suresh Poudel

Mol Psychiatry· November 2024

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An early, novel arginine methylation of KCa3.1 attenuates subsequent T cell exhaustion.
Piyush Sharma, Ao Guo, Suresh Poudel, Emilio Boada-Romero, Katherine C Verbist

bioRxiv· November 2024

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Human-mouse proteomics reveals the shared pathways in Alzheimer's disease and delayed protein turnover in the amyloidome.
Jay M Yarbro, Xian Han, Abhijit Dasgupta, Ka Yang, Danting Liu, Suresh Poudel

bioRxiv· October 2024

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Discovery of immunotherapy targets for pediatric solid and brain tumors by exon-level expression.
Timothy I Shaw, Jessica Wagner, Liqing Tian, Elizabeth Wickman, Suresh Poudel

Nat Commun· May 2024

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Discovery of immunotherapy targets for pediatric solid and brain tumors by exon-level expression.
Timothy I Shaw, Jessica Wagner, Liqing Tian, Elizabeth Wickman, Suresh Poudel

Res Sq· January 2024

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An adaptive stress response that confers cellular resilience to decreased ubiquitination.
Liam C Hunt, Vishwajeeth Pagala, Anna Stephan, Boer Xie, Kiran Kodali, Suresh Poudel

Nat Commun· November 2023

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Dissecting Detergent-Insoluble Proteome in Alzheimer's Disease by TMTc-Corrected Quantitative Mass Spectrometry.
Masihuz Zaman, Yingxue Fu, Ping-Chung Chen, Huan Sun, Shu Yang, Suresh Poudel

Mol Cell Proteomics· August 2023

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JUMPptm: Integrated software for sensitive identification of post-translational modifications and its application in Alzheimer's disease study.
Suresh Poudel, David Vanderwall, Zuo-Fei Yuan, Zhiping Wu, Junmin Peng

Proteomics· February 2023

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29-Plex tandem mass tag mass spectrometry enabling accurate quantification by interference correction.
Huan Sun, Suresh Poudel, David Vanderwall, Dong Geun Lee, Yuxin Li

Proteomics· October 2022

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Alzheimer's disease-associated U1 snRNP splicing dysfunction causes neuronal hyperexcitability and cognitive impairment.
Ping-Chung Chen, Xian Han, Timothy I Shaw, Yingxue Fu, Huan Sun, Suresh Poudel

Nat Aging· October 2022

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Morphine and high-fat diet differentially alter the gut microbiota composition and metabolic function in lean versus obese mice.
J Alfredo Blakeley-Ruiz, Carlee S McClintock, Him K Shrestha, Suresh Poudel, Zamin K Yang

ISME Commun· August 2022

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Meta-omics-aided isolation of an elusive anaerobic arsenic-methylating soil bacterium.
Karen Viacava, Jiangtao Qiao, Andrew Janowczyk, Suresh Poudel, Nicolas Jacquemin

ISME J· July 2022

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Metaproteomics reveals enzymatic strategies deployed by anaerobic microbiomes to maintain lignocellulose deconstruction at high solids.
Payal Chirania, Evert K Holwerda, Richard J Giannone, Xiaoyu Liang, Suresh Poudel

Nat Commun· July 2022

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Deep Single-Cell-Type Proteome Profiling of Mouse Brain by Nonsurgical AAV-Mediated Proximity Labeling.
Xiaojun Sun, Huan Sun, Xian Han, Ping-Chung Chen, Yun Jiao, Suresh Poudel

Anal Chem· April 2022

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Correction to: Proteomic landscape of Alzheimer's Disease: novel insights into pathogenesis and biomarker discovery.
Bing Bai, David Vanderwall, Yuxin Li, Xusheng Wang, Suresh Poudel

Mol Neurodegener· October 2021

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JUMPn: A Streamlined Application for Protein Co-Expression Clustering and Network Analysis in Proteomics.
David Vanderwall, Poudel Suresh, Yingxue Fu, Ji-Hoon Cho, Timothy I Shaw

J Vis Exp· October 2021

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Proteomic landscape of Alzheimer's Disease: novel insights into pathogenesis and biomarker discovery.
Bing Bai, David Vanderwall, Yuxin Li, Xusheng Wang, Suresh Poudel

Mol Neurodegener· August 2021

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