Publications by authors named "Pushkala Jayaraman"

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Liquid Biopsy-Multiomics Link Adhesion Pathway Dysregulation to Kidney Injury Severity.
Nanditha Anandakrishnan, Zhengzi Yi, Zeguo Sun, Tong Liu, Jonathan Haydak, Pushkala Jayaraman

Kidney Int Rep· October 2025

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Personalized Hemodynamic Management Using Reinforcement Learning to Prevent Persistent Acute Kidney Injury After Cardiac Surgery.
Moein Sabounchi, Jacob M Desman, Idan Shenfeld Amit, Wonsuk Oh, Chris Capone, Pushkala Jayaraman

medRxiv· October 2025

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Artificial Intelligence in Nephrology: Pioneering Precision with Multimodal Intelligence.
Pushkala Jayaraman, Ishita Vasudev, Akinchan Bhardwaj, Girish Nadkarni, Ankit Sakhuja

Indian J Nephrol· September 2025

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Peripheral Transcriptomics in Acute and Long-Term Kidney Dysfunction in SARS-CoV-2 Infection.
Pushkala Jayaraman, Madhumitha Rajagopal, Ishan Paranjpe, Mayte Suarez-Farinas, Lora E Liharska

Kidney360· February 2025

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A Primer on Reinforcement Learning in Medicine for Clinicians.
Pushkala Jayaraman, Jacob Desman, Moein Sabounchi, Girish N Nadkarni, Ankit Sakhuja

NPJ Digit Med· November 2024

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Targeted and complete genomic sequencing of the major histocompatibility complex in haplotypic form of individual heterozygous samples.
Taishan Hu, Timothy L Mosbruger, Nikolaos G Tairis, Amalia Dinou, Pushkala Jayaraman

Genome Res· October 2024

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Derivation, external and clinical validation of a deep learning approach for detecting intracranial hypertension.
Faris Gulamali, Pushkala Jayaraman, Ashwin S Sawant, Jacob Desman, Benjamin Fox

NPJ Digit Med· September 2024

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Multimodal fusion learning for long QT syndrome pathogenic genotypes in a racially diverse population.
Joy Jiang, Ha My Thi Vy, Alexander Charney, Patricia Kovatch, Vivek Reddy, Pushkala Jayaraman

NPJ Digit Med· August 2024

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Integrated multiomics implicates dysregulation of ECM and cell adhesion pathways as drivers of severe COVID-associated kidney injury.
Nanditha Anandakrishnan, Zhengzi Yi, Zeguo Sun, Tong Liu, Jonathan Haydak, Pushkala Jayaraman

medRxiv· March 2024

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A novel method leveraging time series data to improve subphenotyping and application in critically ill patients with COVID-19.
Wonsuk Oh, Pushkala Jayaraman, Pranai Tandon, Udit S Chaddha, Patricia Kovatch

Artif Intell Med· February 2024

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Derivation, External Validation and Clinical Implications of a deep learning approach for intracranial pressure estimation using non-cranial waveform measurements.
Faris Gulamali, Pushkala Jayaraman, Ashwin S Sawant, Jacob Desman, Benjamin Fox

medRxiv· January 2024

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Implications of the Use of Artificial Intelligence Predictive Models in Health Care Settings : A Simulation Study.
Akhil Vaid, Ashwin Sawant, Mayte Suarez-Farinas, Juhee Lee, Sanjeev Kaul, Pushkala Jayaraman

Ann Intern Med· October 2023

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Peripheral Transcriptomics in Acute and Long-Term Kidney Dysfunction in SARS-CoV2 Infection.
Pushkala Jayaraman, Madhumitha Rajagopal, Ishan Paranjpe, Lora Liharska, Mayte Suarez-Farinas

medRxiv· October 2023

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Proteomic characterization of acute kidney injury in patients hospitalized with SARS-CoV2 infection.
Ishan Paranjpe, Pushkala Jayaraman, Chen-Yang Su, Sirui Zhou, Steven Chen

Commun Med (Lond)· June 2023

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A Primer in Precision Nephrology: Optimizing Outcomes in Kidney Health and Disease through Data-Driven Medicine.
Pushkala Jayaraman, Andrew Crouse, Girish Nadkarni, Matthew Might

Kidney360· April 2023

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Proteomic Characterization of Acute Kidney Injury in Patients Hospitalized with SARS-CoV2 Infection.
Girish Nadkami, Ishan Paranjpe, Pushkala Jayaraman, Chen-Yang Su, Sirui Zhou

Res Sq· March 2023

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Proteomic Characterization of Acute Kidney Injury in Patients Hospitalized with SARS-CoV2 Infection.
Ishan Paranjpe, Pushkala Jayaraman, Chen-Yang Su, Sirui Zhou, Steven Chen

medRxiv· August 2022

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Molecular Diagnostic Outcomes from 700 Cases: What Can We Learn from a Retrospective Analysis of Clinical Exome Sequencing?
Jill R Murrell, Addie May I Nesbitt, Samuel W Baker, Kieran B Pechter, Jorune Balciuniene, Pushkala Jayaraman

J Mol Diagn· March 2022

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Accurate long-read sequencing allows assembly of the duplicated RHD and RHCE genes harboring variants relevant to blood transfusion.
Zhe Zhang, Hyun Hyung An, Sunitha Vege, Taishan Hu, Shiping Zhang, Pushkala Jayaraman

Am J Hum Genet· January 2022

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Using sequence clustering to identify clinically relevant subphenotypes in patients with COVID-19 admitted to the intensive care unit.
Wonsuk Oh, Pushkala Jayaraman, Ashwin S Sawant, Lili Chan, Matthew A Levin

J Am Med Inform Assoc· January 2022

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AnthOligo: automating the design of oligonucleotides for capture/enrichment technologies.
Pushkala Jayaraman, Timothy Mosbruger, Taishan Hu, Nikolaos G Tairis, Chao Wu

Bioinformatics· August 2020

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Rapid and accurate interpretation of clinical exomes using Phenoxome: a computational phenotype-driven approach.
Chao Wu, Batsal Devkota, Perry Evans, Xiaonan Zhao, Samuel W Baker, Pushkala Jayaraman

Eur J Hum Genet· April 2019

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AUDIOME: a tiered exome sequencing-based comprehensive gene panel for the diagnosis of heterogeneous nonsyndromic sensorineural hearing loss.
Qiaoning Guan, Jorune Balciuniene, Kajia Cao, Zhiqian Fan, Sawona Biswas, Pushkala Jayaraman

Genet Med· December 2018

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Improved rat genome gene prediction by integration of ESTs with RNA-Seq information.
Liping Li, Enguo Chen, Chun Yang, Jun Zhu, Pushkala Jayaraman

Bioinformatics· January 2015

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The pathway ontology - updates and applications.
Victoria Petri, Pushkala Jayaraman, Marek Tutaj, G Thomas Hayman, Jennifer R Smith

J Biomed Semantics· February 2014

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