Publications by authors named "Randy Shoemaker"

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Identification of candidate genes involved in early iron deficiency chlorosis signaling in soybean (Glycine max) roots and leaves.
Adrienne N Moran Lauter, Gregory A Peiffer, Tengfei Yin, Steven A Whitham, Dianne Cook, Randy C Shoemaker

BMC Genomics· August 2014

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Replication protein A subunit 3 and the iron efficiency response in soybean.
Sarah E Atwood, Jamie A O'Rourke, Gregory A Peiffer, Tengfei Yin, Mahbubul Majumder, Randy C Shoemaker

Plant Cell Environ· January 2014

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Transcriptome analyses and virus induced gene silencing identify genes in the Rpp4-mediated Asian soybean rust resistance pathway.
Aguida M A P Morales, Jamie A O Rourke, Martijn van de Mortel, Katherine T Scheider, Timothy J Bancroft, Randy C Shoemaker

Funct Plant Biol· October 2013

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Genomic heterogeneity and structural variation in soybean near isogenic lines.
Adrian O Stec, Pudota B Bhaskar, Yung-Tsi Bolon, Rebecca Nolan, Randy C Shoemaker

Front Plant Sci· May 2013

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Gene expression: sizing it all up.
Jenna Lynn Woody, Randy C Shoemaker

Front Genet· October 2012

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Identification of candidate genes underlying an iron efficiency quantitative trait locus in soybean.
Gregory A Peiffer, Keith E King, Andrew J Severin, Gregory D May, Silvia R Cianzio, Randy C Shoemaker

Plant Physiol· April 2012

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Integration of the Draft Sequence and Physical Map as a Framework for Genomic Research in Soybean (Glycine max (L.) Merr.) and Wild Soybean (Glycine soja Sieb. and Zucc.).
Jungmin Ha, Brian Abernathy, William Nelson, David Grant, Xiaolei Wu, Randy C Shoemaker

G3 (Bethesda)· March 2012

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Evolutionary and comparative analyses of the soybean genome.
Steven B Cannon, Randy C Shoemaker

Breed Sci· January 2012

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Sequencing crop genomes: approaches and applications.
Scott A Jackson, Aiko Iwata, Suk-Ha Lee, Jeremy Schmutz, Randy Shoemaker

New Phytol· September 2011

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Changes in twelve homoeologous genomic regions in soybean following three rounds of polyploidy.
Andrew J Severin, Steven B Cannon, Michelle M Graham, David Grant, Randy C Shoemaker

Plant Cell· September 2011

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Applying small-scale DNA signatures as an aid in assembling soybean chromosome sequences.
Myron Peto, David M Grant, Randy C Shoemaker, Steven B Cannon

Adv Bioinformatics· July 2011

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Gene expression patterns are correlated with genomic and genic structure in soybean.
Jenna L Woody, Andrew J Severin, Yung-Tsi Bolon, Bindu Joseph, Brian W Diers, Randy C Shoemaker

Genome· January 2011

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An integrative approach to genomic introgression mapping.
Andrew J Severin, Gregory A Peiffer, Wayne W Xu, David L Hyten, Bruna Bucciarelli, Randy C Shoemaker

Plant Physiol· September 2010

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Evolutionary conservation, diversity and specificity of LTR-retrotransposons in flowering plants: insights from genome-wide analysis and multi-specific comparison.
Jianchang Du, Zhixi Tian, Christian S Hans, Howard M Laten, Steven B Cannon, Randy C Shoemaker

Plant J· August 2010

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RNA-Seq Atlas of Glycine max: a guide to the soybean transcriptome.
Andrew J Severin, Jenna L Woody, Yung-Tsi Bolon, Bindu Joseph, Brian W Diers, Randy C Shoemaker

BMC Plant Biol· August 2010

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Applications and methods utilizing the Simple Semantic Web Architecture and Protocol (SSWAP) for bioinformatics resource discovery and disparate data and service integration.
Rex T Nelson, Shulamit Avraham, Randy C Shoemaker, Gregory D May, Doreen Ware

BioData Min· June 2010

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Complementary genetic and genomic approaches help characterize the linkage group I seed protein QTL in soybean.
Yung-Tsi Bolon, Bindu Joseph, Steven B Cannon, Michelle A Graham, Brian W Diers, Randy C Shoemaker

BMC Plant Biol· March 2010

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SoyTEdb: a comprehensive database of transposable elements in the soybean genome.
Jianchang Du, David Grant, Zhixi Tian, Rex T Nelson, Liucun Zhu, Randy C Shoemaker

BMC Genomics· February 2010

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SoyBase, the USDA-ARS soybean genetics and genomics database.
David Grant, Rex T Nelson, Steven B Cannon, Randy C Shoemaker

Nucleic Acids Res· January 2010

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Genome sequence of the palaeopolyploid soybean.
Jeremy Schmutz, Steven B Cannon, Jessica Schlueter, Jianxin Ma, Therese Mitros, Randy C Shoemaker

Nature· January 2010

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High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence.
David L Hyten, Steven B Cannon, Qijian Song, Nathan Weeks, Edward W Fickus, Randy C Shoemaker

BMC Genomics· January 2010

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Bifurcation and enhancement of autonomous-nonautonomous retrotransposon partnership through LTR Swapping in soybean.
Jianchang Du, Zhixi Tian, Nathan J Bowen, Jeremy Schmutz, Randy C Shoemaker

Plant Cell· January 2010

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Integrating microarray analysis and the soybean genome to understand the soybeans iron deficiency response.
Jamie A O'Rourke, Rex T Nelson, David Grant, Jeremy Schmutz, Jane Grimwood, Randy C Shoemaker

BMC Genomics· August 2009

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Identification and analyses of candidate genes for rpp4-mediated resistance to Asian soybean rust in soybean.
Jenelle D F Meyer, Danielle C G Silva, Chunling Yang, Kerry F Pedley, Chunquan Zhang, Randy C Shoemaker

Plant Physiol· May 2009

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Establishment of a soybean (Glycine max Merr. L) transposon-based mutagenesis repository.
Melanie Mathieu, Elizabeth K Winters, Fanming Kong, Jinrong Wan, Shaoxing Wang, Randy C Shoemaker

Planta· January 2009

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