Publications by authors named "Recep Adiyaman"

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Inter-platelet communication driving thrombus formation is regulated by extracellular calpain-1 cleavage of connexin 62.
Kirk A Taylor, Amro Elgheznawy, Recep Adiyaman, Tyler L Horn, Sarah Parkes

Haematologica· August 2025

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Highlights of Model Quality Assessment in CASP16.
Alisia Fadini, Recep Adiyaman, Shaima N Alhaddad, Behnosh Behzadi, Jianlin Cheng

Proteins· August 2025

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Prediction and quality assessment of protein quaternary structure models using the MultiFOLD2 and ModFOLDdock2 servers.
Liam J McGuffin, Shaima N Alhaddad, Behnosh Behzadi, Nicholas S Edmunds, Ahmet G Genc, Recep Adiyaman

Nucleic Acids Res· July 2025

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Estimation of model accuracy in CASP15 using the ModFOLDdock server.
Nicholas S Edmunds, Shuaa M A Alharbi, Ahmet G Genc, Recep Adiyaman, Liam J McGuffin

Proteins· December 2023

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Prediction of protein structures, functions and interactions using the IntFOLD7, MultiFOLD and ModFOLDdock servers.
Liam J McGuffin, Nicholas S Edmunds, Ahmet G Genc, Shuaa M A Alharbi, Bajuna R Salehe, Recep Adiyaman

Nucleic Acids Res· July 2023

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Improvement of protein tertiary and quaternary structure predictions using the ReFOLD refinement method and the AlphaFold2 recycling process.
Recep Adiyaman, Nicholas S Edmunds, Ahmet G Genc, Shuaa M A Alharbi, Liam J McGuffin

Bioinform Adv· June 2023

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Using Local Protein Model Quality Estimates to Guide a Molecular Dynamics-Based Refinement Strategy.
Recep Adiyaman, Liam J McGuffin

Methods Mol Biol· March 2023

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ModFOLD8: accurate global and local quality estimates for 3D protein models.
Liam J McGuffin, Fahd M F Aldowsari, Shuaa M A Alharbi, Recep Adiyaman

Nucleic Acids Res· July 2021

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ReFOLD3: refinement of 3D protein models with gradual restraints based on predicted local quality and residue contacts.
Recep Adiyaman, Liam J McGuffin

Nucleic Acids Res· July 2021

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Structural, functional, and mechanistic insights uncover the fundamental role of orphan connexin-62 in platelets.
Khaled A Sahli, Gagan D Flora, Parvathy Sasikumar, Ali H Maghrabi, Lisa-Marie Holbrook, Recep Adiyaman

Blood· February 2021

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IntFOLD: an integrated web resource for high performance protein structure and function prediction.
Liam J McGuffin, Recep Adiyaman, Ali H A Maghrabi, Ahmad N Shuid, Danielle A Brackenridge

Nucleic Acids Res· July 2019

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Methods for the Refinement of Protein Structure 3D Models.
Recep Adiyaman, Liam James McGuffin

Int J Mol Sci· May 2019

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