Publications by authors named "Richard D Pearson"

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Pf8: an open dataset of genome variation in 33,325 worldwide samples.

Wellcome Open Res· November 2025

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Understanding the global rise of artemisinin resistance: Insights from over 100,000 samples.
Andrew J Balmer, Nina F D White, Eyyüb S Ünlü, Chiyun Lee, Richard D Pearson

Elife· October 2025

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Microhaplotype deep sequencing assays to capture Plasmodium vivax infection lineages.
Mariana Kleinecke, Edwin Sutanto, Angela Rumaseb, Kian Soon Hoon, Hidayat Trimarsanto, Richard D Pearson

Nat Commun· August 2025

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An expanded method for malaria parasite genetic surveillance using targeted nanopore sequencing.
Alexandria J R Harrott, Collins M Morang'a, Richard D Pearson, Mona-Liza Sakyi, Ahmed Osumanu

Gates Open Res· July 2025

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Genetic surveillance of Plasmodium falciparum populations following treatment policy revisions in the Greater Mekong Subregion.
Varanya Wasakul, Tess D Verschuuren, Nguyen Thuy-Nhien, Ethan Booth, Huynh Hong Quang, Richard D Pearson

Nat Commun· May 2025

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Disparate co-evolution and prevalence of sulfadoxine and pyrimethamine resistance alleles and haplotypes at dhfr and dhps genes across Africa.
Nina F D White, Georgia Whitton, Varanya Wasakul, Lucas Amenga-Etego, Antoine Dara, Richard D Pearson

Sci Rep· April 2025

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T-cell activation and senescence in asymptomatic HIV/Leishmania infantum co-infection.
Carolina de Oliveira Mendes-Aguiar, Manoella do Monte Alves, Amanda de Albuquerque Lopes Machado, Glória Regina de Góis Monteiro, Iara Marques Medeiros, Richard D Pearson

PLoS Negl Trop Dis· March 2025

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Identification of complex Plasmodium falciparum genetic backgrounds circulating in Africa: a multicountry genomic epidemiology analysis.
Olivo Miotto, Alfred Amambua-Ngwa, Lucas N Amenga-Etego, Muzamil M Abdel Hamid, Ishag Adam, Richard D Pearson

Lancet Microbe· December 2024

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Pf-HaploAtlas: an interactive web app for spatiotemporal analysis of Plasmodium falciparum genes.
Chiyun Lee, Eyyüb S Ünlü, Nina F D White, Jacob Almagro-Garcia, Cristina Ariani, Richard D Pearson

Bioinformatics· November 2024

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Drug resistance and vaccine target surveillance of Plasmodium falciparum using nanopore sequencing in Ghana.
Sophia T Girgis, Edem Adika, Felix E Nenyewodey, Dodzi K Senoo Jnr, Joyce M Ngoi, Richard D Pearson

Nat Microbiol· December 2023

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Genomics of Plasmodium vivax in Colombia reveals evidence of local bottle-necking and inter-country connectivity in the Americas.
Edwin Sutanto, Zuleima Pava, Diego F Echeverry, Tatiana M Lopera-Mesa, Lidia Madeline Montenegro, Richard D Pearson

Sci Rep· November 2023

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Genomic analysis of Plasmodium vivax describes patterns of connectivity and putative drivers of adaptation in Ethiopia.
Alebachew Messele Kebede, Edwin Sutanto, Hidayat Trimarsanto, Ernest Diez Benavente, Mariana Barnes, Richard D Pearson

Sci Rep· November 2023

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Chloroquine resistance evolution in Plasmodium falciparum is mediated by the putative amino acid transporter AAT1.
Alfred Amambua-Ngwa, Katrina A Button-Simons, Xue Li, Sudhir Kumar, Katelyn Vendrely Brenneman, Richard D Pearson

Nat Microbiol· July 2023

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Malaria outbreak in Laos driven by a selective sweep for Plasmodium falciparum kelch13 R539T mutants: a genetic epidemiology analysis.
Varanya Wasakul, Areeya Disratthakit, Mayfong Mayxay, Keobouphaphone Chindavongsa, Viengphone Sengsavath, Richard D Pearson

Lancet Infect Dis· May 2023

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Generation of a mutator parasite to drive resistome discovery in Plasmodium falciparum.
Krittikorn Kümpornsin, Theerarat Kochakarn, Tomas Yeo, John Okombo, Madeline R Luth, Richard D Pearson

Nat Commun· May 2023

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T-cell activation, senescence, and exhaustion in asymptomatic HIV/Leish co-infection.
Carolina de Oliveira Mendes-Aguiar, Manoella do Monte Alves, Amanda de Albuquerque Lopes Machado, Glória Regina de Góis Monteiro, Iara Marques Medeiros, Richard D Pearson

medRxiv· March 2023

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A molecular barcode and web-based data analysis tool to identify imported Plasmodium vivax malaria.
Hidayat Trimarsanto, Roberto Amato, Richard D Pearson, Edwin Sutanto, Rintis Noviyanti

Commun Biol· December 2022

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Geographical distribution and genetic diversity of Plasmodium vivax reticulocyte binding protein 1a correlates with patient antigenicity.
Ji-Hoon Park, Min-Hee Kim, Edwin Sutanto, Seok-Won Na, Min-Jae Kim, Richard D Pearson

PLoS Negl Trop Dis· June 2022

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An open dataset of genome variation in 1,895 worldwide samples.

Wellcome Open Res· April 2022

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Malaria protection due to sickle haemoglobin depends on parasite genotype.
Gavin Band, Ellen M Leffler, Muminatou Jallow, Fatoumatta Sisay-Joof, Carolyne M Ndila, Richard D Pearson

Nature· February 2022

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Genetic surveillance in the Greater Mekong subregion and South Asia to support malaria control and elimination.
Christopher G Jacob, Nguyen Thuy-Nhien, Mayfong Mayxay, Richard J Maude, Huynh Hong Quang, Richard D Pearson

Elife· August 2021

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Disseminated Cutaneous Leishmaniasis and Alcohol Misuse, Northeast Brazil, 2015-2018.
Anastácio Q Sousa, Pedro D T Sindeaux Filho, Diane I M Cavalcante, Mércia S Frutuoso, Francisco F Pereira, Richard D Pearson

Emerg Infect Dis· August 2021

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An open dataset of genome variation in 7,000 worldwide samples.

Wellcome Open Res· July 2021

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Transmission of Artemisinin-Resistant Malaria Parasites to Mosquitoes under Antimalarial Drug Pressure.
Kathrin Witmer, Farah A Dahalan, Michael J Delves, Sabrina Yahiya, Oliver J Watson, Richard D Pearson

Antimicrob Agents Chemother· December 2020

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Emergence of artemisinin-resistant Plasmodium falciparum with kelch13 C580Y mutations on the island of New Guinea.
Olivo Miotto, Makoto Sekihara, Shin-Ichiro Tachibana, Masato Yamauchi, Richard D Pearson

PLoS Pathog· December 2020

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