Publications by authors named "Rickard Sandberg"

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A striosomal accumbens pathway drives stereotyped behavior through an aversive Esr1+ hypothalamic-habenula circuit.
Thomas Contesse, Buse Yel Bektash, Marta Graziano, Chiara Forastieri, Alessandro Contestabile, Rickard Sandberg

Sci Adv· November 2025

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Identification of proliferating neural progenitors in the adult human hippocampus.
Ionut Dumitru, Marta Paterlini, Margherita Zamboni, Christoph Ziegenhain, Sarantis Giatrellis, Rickard Sandberg

Science· July 2025

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Deciphering direct transcriptional effects of epigenetic compounds through large-scale new RNA profiling.
Leonard Hartmanis, Daniel Ramsköld, Gert-Jan Hendriks, Per Johnsson, Gustav Hallén, Rickard Sandberg

Nat Commun· July 2025

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Efficient profiling of total RNA in single cells with STORM-seq.
Benjamin K Johnson, Mary F Majewski, H Josh Jang, Rebecca A Siwicki, Marc Wegener, Rickard Sandberg

bioRxiv· May 2025

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Regionalized cell and gene signatures govern esophageal epithelial homeostasis.
David Grommisch, Harald Lund, Evelien Eenjes, Anais Julien, Christian Göritz, Rickard Sandberg

Dev Cell· January 2025

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Diffusion Smart-seq3 of breast cancer spheroids to explore spatial tumor biology and test evolutionary principles of tumor heterogeneity.
Antony Cougnoux, Loay Mahmoud, Per A Johnsson, Alper Eroglu, Louise Gsell, Rickard Sandberg

Sci Rep· January 2025

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Single-cell new RNA sequencing reveals principles of transcription at the resolution of individual bursts.
Daniel Ramsköld, Gert-Jan Hendriks, Anton J M Larsson, Juliane V Mayr, Christoph Ziegenhain, Rickard Sandberg

Nat Cell Biol· October 2024

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Introducing synthetic thermostable RNase inhibitors to single-cell RNA-seq.
Joyce Carol Noble, Antonio Lentini, Michael Hagemann-Jensen, Rickard Sandberg, Björn Reinius

Nat Commun· September 2024

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Inferring clonal somatic mutations directed by X chromosome inactivation status in single cells.
Ilke Demirci, Anton J M Larsson, Xinsong Chen, Johan Hartman, Rickard Sandberg

Genome Biol· August 2024

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Alternative platelet differentiation pathways initiated by nonhierarchically related hematopoietic stem cells.
Joana Carrelha, Stefania Mazzi, Axel Winroth, Michael Hagemann-Jensen, Christoph Ziegenhain, Rickard Sandberg

Nat Immunol· June 2024

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Inflammatory, metabolic, and sex-dependent gene-regulatory dynamics of microglia and macrophages in neonatal hippocampus after hypoxia-ischemia.
Elena Di Martino, Anoop Ambikan, Daniel Ramsköld, Takashi Umekawa, Sarantis Giatrellis, Rickard Sandberg

iScience· April 2024

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Clonally heritable gene expression imparts a layer of diversity within cell types.
Jeff E Mold, Martin H Weissman, Michael Ratz, Michael Hagemann-Jensen, Joanna Hård, Rickard Sandberg

Cell Syst· February 2024

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Erythroid Differentiation Enhances RNA Mis-Splicing in SF3B1-Mutant Myelodysplastic Syndromes with Ring Sideroblasts.
Pedro L Moura, Teresa Mortera-Blanco, Isabel J Hofman, Gabriele Todisco, Warren W Kretzschmar, Rickard Sandberg

Cancer Res· January 2024

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Tissue-specific RNA Polymerase II promoter-proximal pause release and burst kinetics in a Drosophila embryonic patterning network.
George Hunt, Roshan Vaid, Sergei Pirogov, Alexander Pfab, Christoph Ziegenhain, Rickard Sandberg

Genome Biol· January 2024

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Platelet and myeloid lineage biases of transplanted single perinatal mouse hematopoietic stem cells.
Karin Belander Strålin, Joana Carrelha, Axel Winroth, Christoph Ziegenhain, Michael Hagemann-Jensen, Rickard Sandberg

Cell Res· November 2023

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Spatial and single-cell profiling of the metabolome, transcriptome and epigenome of the aging mouse liver.
Chrysa Nikopoulou, Niklas Kleinenkuhnen, Swati Parekh, Tonantzi Sandoval, Christoph Ziegenhain, Rickard Sandberg

Nat Aging· November 2023

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Age prediction from human blood plasma using proteomic and small RNA data: a comparative analysis.
Jérôme Salignon, Omid R Faridani, Tasso Miliotis, Georges E Janssens, Ping Chen, Rickard Sandberg

Aging (Albany NY)· June 2023

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A small noncoding RNA links ribosome recovery and translation control to dedifferentiation during salamander limb regeneration.
Elaiyaraja Subramanian, Ahmed Elewa, Gonçalo Brito, Anoop Kumar, Åsa Segerstolpe, Rickard Sandberg

Dev Cell· March 2023

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Reconstructing clonal tree for phylo-phenotypic characterization of cancer using single-cell transcriptomics.
Seong-Hwan Jun, Hosein Toosi, Jeff Mold, Camilla Engblom, Xinsong Chen, Rickard Sandberg

Nat Commun· February 2023

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Scalable single-cell RNA sequencing from full transcripts with Smart-seq3xpress.
Michael Hagemann-Jensen, Christoph Ziegenhain, Rickard Sandberg

Nat Biotechnol· October 2022

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Molecular spikes: a gold standard for single-cell RNA counting.
Christoph Ziegenhain, Gert-Jan Hendriks, Michael Hagemann-Jensen, Rickard Sandberg

Nat Methods· May 2022

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Transcriptional kinetics and molecular functions of long noncoding RNAs.
Per Johnsson, Christoph Ziegenhain, Leonard Hartmanis, Gert-Jan Hendriks, Michael Hagemann-Jensen, Rickard Sandberg

Nat Genet· March 2022

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Understanding interactions between risk factors, and assessing the utility of the additive and multiplicative models through simulations.
Lina-Marcela Diaz-Gallo, Boel Brynedal, Helga Westerlind, Rickard Sandberg, Daniel Ramsköld

PLoS One· October 2021

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BAMboozle removes genetic variation from human sequence data for open data sharing.
Christoph Ziegenhain, Rickard Sandberg

Nat Commun· October 2021

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Divergent clonal differentiation trajectories establish CD8 memory T cell heterogeneity during acute viral infections in humans.
Jeff E Mold, Laurent Modolo, Joanna Hård, Margherita Zamboni, Anton J M Larsson, Rickard Sandberg, Johan K Sandberg

Cell Rep· May 2021

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