Publications by authors named "Robert D Fleischmann"

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Characterizing the Escherichia coli O157:H7 proteome including protein associations with higher order assemblies.
Rembert Pieper, Quanshun Zhang, David J Clark, Shih-Ting Huang, Moo-Jin Suh, Robert D Fleischmann

PLoS One· May 2012

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Development stage-specific proteomic profiling uncovers small, lineage specific proteins most abundant in the Aspergillus Fumigatus conidial proteome.
Moo-Jin Suh, Natalie D Fedorova, Steven E Cagas, Susan Hastings, Robert D Fleischmann

Proteome Sci· April 2012

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Investigating the genome diversity of B. cereus and evolutionary aspects of B. anthracis emergence.
Leka Papazisi, David A Rasko, Shashikala Ratnayake, Geoff R Bock, Brian G Remortel, Robert D Fleischmann

Genomics· July 2011

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In vivo versus in vitro protein abundance analysis of Shigella dysenteriae type 1 reveals changes in the expression of proteins involved in virulence, stress and energy metabolism.
Srilatha Kuntumalla, Quanshun Zhang, John C Braisted, Robert D Fleischmann, Scott N Peterson

BMC Microbiol· June 2011

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Recombinant expression and functional analysis of proteases from Streptococcus pneumoniae, Bacillus anthracis, and Yersinia pestis.
Keehwan Kwon, Jeremy Hasseman, Saeeda Latham, Carissa Grose, Yu Do, Robert D Fleischmann

BMC Biochem· May 2011

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Monitoring the long-term molecular epidemiology of the pneumococcus and detection of potential 'vaccine escape' strains.
Gagan A Pandya, M Catherine McEllistrem, Pratap Venepally, Michael H Holmes, Behnam Jarrahi, Robert D Fleischmann

PLoS One· January 2011

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Tracing phylogenomic events leading to diversity of Haemophilus influenzae and the emergence of Brazilian Purpuric Fever (BPF)-associated clones.
Leka Papazisi, Shashikala Ratnayake, Brian G Remortel, Geoffrey R Bock, Wei Liang, Robert D Fleischmann

Genomics· November 2010

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Using chemical derivatization and mass spectrometric analysis to characterize the post-translationally modified Staphylococcus aureus surface protein G.
Moo-Jin Suh, David J Clark, Prashanth P Parmer, Robert D Fleischmann, Scott N Peterson

Biochim Biophys Acta· June 2010

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Allelic exchange and mutant selection demonstrate that common clinical embCAB gene mutations only modestly increase resistance to ethambutol in Mycobacterium tuberculosis.
Hassan Safi, Robert D Fleischmann, Scott N Peterson, Marcus B Jones, Behnam Jarrahi

Antimicrob Agents Chemother· January 2010

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Proteomic analysis of iron acquisition, metabolic and regulatory responses of Yersinia pestis to iron starvation.
Rembert Pieper, Shih-Ting Huang, Prashanth P Parmar, David J Clark, Hamid Alami, Robert D Fleischmann

BMC Microbiol· January 2010

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Assessing the utility of whole-genome amplified serum DNA for array-based high throughput genotyping.
Kristine L Bucasas, Gagan A Pandya, Sonal Pradhan, Robert D Fleischmann, Scott N Peterson

BMC Genet· December 2009

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The Shigella dysenteriae serotype 1 proteome, profiled in the host intestinal environment, reveals major metabolic modifications and increased expression of invasive proteins.
Rembert Pieper, Quanshun Zhang, Prashanth P Parmar, Shih-Ting Huang, David J Clark, Robert D Fleischmann

Proteomics· November 2009

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Whole genome single nucleotide polymorphism based phylogeny of Francisella tularensis and its application to the development of a strain typing assay.
Gagan A Pandya, Michael H Holmes, Jeannine M Petersen, Sonal Pradhan, Svetlana A Karamycheva, Robert D Fleischmann

BMC Microbiol· October 2009

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High quality protein microarray using in situ protein purification.
Keehwan Kwon, Carissa Grose, Rembert Pieper, Gagan A Pandya, Robert D Fleischmann

BMC Biotechnol· August 2009

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Comparison of two label-free global quantitation methods, APEX and 2D gel electrophoresis, applied to the Shigella dysenteriae proteome.
Srilatha Kuntumalla, John C Braisted, Shih-Ting Huang, Prashanth P Parmar, David J Clark, Robert D Fleischmann

Proteome Sci· June 2009

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Temperature and growth phase influence the outer-membrane proteome and the expression of a type VI secretion system in Yersinia pestis.
Rembert Pieper, Shih-Ting Huang, Jeffrey M Robinson, David J Clark, Hamid Alami, Robert D Fleischmann

Microbiology (Reading)· February 2009

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Integral and peripheral association of proteins and protein complexes with Yersinia pestis inner and outer membranes.
Rembert Pieper, Shih-Ting Huang, David J Clark, Jeffrey M Robinson, Hamid Alami, Robert D Fleischmann

Proteome Sci· February 2009

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The APEX Quantitative Proteomics Tool: generating protein quantitation estimates from LC-MS/MS proteomics results.
John C Braisted, Srilatha Kuntumalla, Christine Vogel, Edward M Marcotte, Alan R Rodrigues, Robert D Fleischmann

BMC Bioinformatics· December 2008

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Characterizing the dynamic nature of the Yersinia pestis periplasmic proteome in response to nutrient exhaustion and temperature change.
Rembert Pieper, Shih-Ting Huang, David J Clark, Jeffrey M Robinson, Prashanth P Parmar, Robert D Fleischmann

Proteomics· April 2008

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A bioinformatic filter for improved base-call accuracy and polymorphism detection using the Affymetrix GeneChip whole-genome resequencing platform.
Gagan A Pandya, Michael H Holmes, Sirisha Sunkara, Andrew Sparks, Yun Bai, Robert D Fleischmann

Nucleic Acids Res· January 2008

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Widespread Occurrence of Non-Enzymatic Deamidations of Asparagine Residues in Yersinia pestis Proteins Resulting from Alkaline pH Membrane Extraction Conditions.
Moo-Jin Suh, Hamid Alami, David J Clark, Prashanth P Parmar, Jeffrey M Robinson, Robert D Fleischmann

Open Proteomics J· January 2008

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Transcriptional regulation of multi-drug tolerance and antibiotic-induced responses by the histone-like protein Lsr2 in M. tuberculosis.
Roberto Colangeli, Danica Helb, Catherine Vilchèze, Manzour Hernando Hazbón, Chee-Gun Lee, Robert D Fleischmann

PLoS Pathog· June 2007

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Role of large sequence polymorphisms (LSPs) in generating genomic diversity among clinical isolates of Mycobacterium tuberculosis and the utility of LSPs in phylogenetic analysis.
David Alland, David W Lacher, Manzour Hernando Hazbón, Alifiya S Motiwala, Weihong Qi, Robert D Fleischmann

J Clin Microbiol· January 2007

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Comparative proteomic analysis of Staphylococcus aureus strains with differences in resistance to the cell wall-targeting antibiotic vancomycin.
Rembert Pieper, Christine L Gatlin-Bunai, Emmanuel F Mongodin, Prashanth P Parmar, Shih-Ting Huang, Robert D Fleischmann

Proteomics· August 2006

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Proteomic profiling of cell envelope-associated proteins from Staphylococcus aureus.
Christine L Gatlin, Rembert Pieper, Shih-Ting Huang, Emmanuel Mongodin, Elizabeth Gebregeorgis, Robert D Fleischmann

Proteomics· March 2006

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