Publications by authors named "Rodchenkov Igor"

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Author-sourced capture of pathway knowledge in computable form using Biofactoid.
Jeffrey V Wong, Max Franz, Metin Can Siper, Dylan Fong, Funda Durupinar, Igor Rodchenkov

Elife· December 2021

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Pathway Commons 2019 Update: integration, analysis and exploration of pathway data.
Igor Rodchenkov, Ozgun Babur, Augustin Luna, Bulent Arman Aksoy, Jeffrey V Wong

Nucleic Acids Res· January 2020

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Using biological pathway data with paxtools.
Emek Demir, Ozgün Babur, Igor Rodchenkov, Bülent Arman Aksoy, Ken I Fukuda

PLoS Comput Biol· April 2014

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Pattern search in BioPAX models.
Özgün Babur, Bülent Arman Aksoy, Igor Rodchenkov, Selçuk Onur Sümer, Chris Sander

Bioinformatics· January 2014

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The BioPAX Validator.
Igor Rodchenkov, Emek Demir, Chris Sander, Gary D Bader

Bioinformatics· October 2013

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Pathway Commons, a web resource for biological pathway data.
Ethan G Cerami, Benjamin E Gross, Emek Demir, Igor Rodchenkov, Ozgün Babur

Nucleic Acids Res· January 2011

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The BioPAX community standard for pathway data sharing.
Emek Demir, Michael P Cary, Suzanne Paley, Ken Fukuda, Christian Lemer, Igor Rodchenkov

Nat Biotechnol· September 2010

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CCancer: a bird's eye view on gene lists reported in cancer-related studies.
Sabine Dietmann, Wanseon Lee, Philip Wong, Igor Rodchenkov, Alexey V Antonov

Nucleic Acids Res· July 2010

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PPI spider: a tool for the interpretation of proteomics data in the context of protein-protein interaction networks.
Alexey V Antonov, Sabine Dietmann, Igor Rodchenkov, Hans W Mewes

Proteomics· May 2009

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PLIPS, an automatically collected database of protein lists reported by proteomics studies.
Alexey V Antonov, Sabine Dietmann, Philip Wong, Rodchenkov Igor, Hans W Mewes

J Proteome Res· March 2009

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Beyond the 'best' match: machine learning annotation of protein sequences by integration of different sources of information.
Igor V Tetko, Igor V Rodchenkov, Mathias C Walter, Thomas Rattei, Hans-Werner Mewes

Bioinformatics· March 2008

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