Publications by authors named "Ruud Berger"

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Role of amino acids in rheumatoid arthritis studied by metabolomics.
Min He, Amy C Harms, Eduard van Wijk, Mei Wang, Ruud Berger

Int J Rheum Dis· January 2019

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Development and application of a UHPLC-MS/MS metabolomics based comprehensive systemic and tissue-specific screening method for inflammatory, oxidative and nitrosative stress.
Johannes C Schoeman, Amy C Harms, Michel van Weeghel, Ruud Berger, Rob J Vreeken

Anal Bioanal Chem· April 2018

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Fetal Metabolic Stress Disrupts Immune Homeostasis and Induces Proinflammatory Responses in Human Immunodeficiency Virus Type 1- and Combination Antiretroviral Therapy-Exposed Infants.
Johannes C Schoeman, Gontse P Moutloatse, Amy C Harms, Rob J Vreeken, Henriette J Scherpbier, Ruud Berger

J Infect Dis· August 2017

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Ultra-weak photon emission as a dynamic tool for monitoring oxidative stress metabolism.
Rosilene Cristina Rossetto Burgos, Johannes Cornelius Schoeman, Lennart Jan van Winden, Kateřina Červinková, Rawi Ramautar, Ruud Berger

Sci Rep· April 2017

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Differences between serum polar lipid profiles of male and female rheumatoid arthritis patients in response to glucocorticoid treatment.
Junzeng Fu, Bart V J Cuppen, Paco M J Welsing, Herman van Wietmarschen, Amy C Harms, Ruud Berger

Inflammopharmacology· December 2016

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Tracking biochemical changes correlated with ultra-weak photon emission using metabolomics.
Rosilene Cristina Rossetto Burgos, Kateřina Červinková, Tom van der Laan, Rawi Ramautar, Eduard P A van Wijk, Ruud Berger

J Photochem Photobiol B· October 2016

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Collagen Induced Arthritis in DBA/1J Mice Associates with Oxylipin Changes in Plasma.
Min He, Eduard van Wijk, Ruud Berger, Mei Wang, Katrin Strassburg

Mediators Inflamm· September 2016

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Metabolomics profiling of the free and total oxidised lipids in urine by LC-MS/MS: application in patients with rheumatoid arthritis.
Junzeng Fu, Johannes C Schoeman, Amy C Harms, Herman A van Wietmarschen, Rob J Vreeken, Ruud Berger

Anal Bioanal Chem· September 2016

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Discovery of biochemical biomarkers for aggression: A role for metabolomics in psychiatry.
Fiona A Hagenbeek, Cornelis Kluft, Thomas Hankemeier, Meike Bartels, Harmen H M Draisma, Ruud Berger

Am J Med Genet B Neuropsychiatr Genet· July 2016

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Metabolic characterization of the natural progression of chronic hepatitis B.
Johannes C Schoeman, Jun Hou, Amy C Harms, Rob J Vreeken, Ruud Berger

Genome Med· June 2016

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First-Trimester Serum Acylcarnitine Levels to Predict Preeclampsia: A Metabolomics Approach.
Maria P H Koster, Rob J Vreeken, Amy C Harms, Adrie D Dane, Sylwia Kuc, Ruud Berger

Dis Markers· February 2016

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The Copper Metabolism MURR1 domain protein 1 (COMMD1) modulates the aggregation of misfolded protein species in a client-specific manner.
Willianne I M Vonk, Vaishali Kakkar, Paulina Bartuzi, Dick Jaarsma, Ruud Berger

PLoS One· December 2015

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Allele compensation in tip60+/- mice rescues white adipose tissue function in vivo.
Yuan Gao, Nicole Hamers, Maryam Rakhshandehroo, Ruud Berger, John Lough

PLoS One· June 2015

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A protocol for quantifying lipid peroxidation in cellular systems by F2-isoprostane analysis.
Christiaan F Labuschagne, Niels J F van den Broek, Pjotr Postma, Ruud Berger, Arjan B Brenkman

PLoS One· February 2015

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Metabolomics profiling for identification of novel potential markers in early prediction of preeclampsia.
Sylwia Kuc, Maria P H Koster, Jeroen L A Pennings, Thomas Hankemeier, Ruud Berger

PLoS One· January 2015

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Assessing the metabolic effects of prednisolone in healthy volunteers using urine metabolic profiling.
Sandrine Ellero-Simatos, Ewa Szymańska, Ton Rullmann, Wim Ha Dokter, Raymond Ramaker, Ruud Berger

Genome Med· August 2014

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Early adipogenesis is regulated through USP7-mediated deubiquitination of the histone acetyltransferase TIP60.
Yuan Gao, Arjen Koppen, Maryam Rakhshandehroo, Ismayil Tasdelen, Stan F van de Graaf, Ruud Berger

Nat Commun· May 2014

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PPARγ regulates expression of carbohydrate sulfotransferase 11 (CHST11/C4ST1), a regulator of LPL cell surface binding.
Ismayil Tasdelen, Ruud Berger, Eric Kalkhoven

PLoS One· December 2013

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Human metabolomics: strategies to understand biology.
Rawi Ramautar, Ruud Berger, Jan van der Greef, Thomas Hankemeier

Curr Opin Chem Biol· October 2013

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Quantification of in vivo oxidative damage in Caenorhabditis elegans during aging by endogenous F3-isoprostane measurement.
Christiaan F Labuschagne, Edwin C A Stigter, Margriet M W B Hendriks, Ruud Berger, Joshua Rokach

Aging Cell· April 2013

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The serine/threonine phosphatase PPM1B (PP2Cβ) selectively modulates PPARγ activity.
Ismayil Tasdelen, Olivier van Beekum, Olena Gorbenko, Veerle Fleskens, Niels J F van den Broek, Ruud Berger

Biochem J· April 2013

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A Patient with Congenital Generalized Lipodystrophy Due To a Novel Mutation in BSCL2: Indications for Secondary Mitochondrial Dysfunction.
Ellen H Jeninga, Monique de Vroede, Nicole Hamers, Johannes M P J Breur, Nanda M Verhoeven-Duif, Ruud Berger

JIMD Rep· February 2013

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D-serine influences synaptogenesis in a p19 cell model.
Sabine A Fuchs, Martin W Roeleveld, Leo W J Klomp, Ruud Berger, Tom J de Koning

JIMD Rep· February 2013

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A novel RNAi lethality rescue screen to identify regulators of adipogenesis.
Olivier van Beekum, Yuan Gao, Ruud Berger, Arjen Koppen, Eric Kalkhoven

PLoS One· October 2012

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Quantitative profiling of oxylipins through comprehensive LC-MS/MS analysis: application in cardiac surgery.
Katrin Strassburg, Annemarie M L Huijbrechts, Kirsten A Kortekaas, Jan H Lindeman, Theresa L Pedersen, Ruud Berger

Anal Bioanal Chem· September 2012

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