Publications by authors named "Ryo Urano"

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Molecular Insight into the Hepatitis B Virus: Coarse-Grained Simulations of the Envelope-Capsid Complex.
Ryo Urano, Wataru Shinoda

J Phys Chem Lett· January 2026

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Structural insights into a citrate transporter that mediates aluminum tolerance in barley.
Tran Nguyen Thao, Namiki Mitani-Ueno, Ryo Urano, Yasunori Saitoh, Peitong Wang

Proc Natl Acad Sci U S A· August 2025

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Prediction of self-diffusion coefficients of chemically diverse pure liquids by all-atom molecular dynamics simulations.
Hiromi Baba, Ryo Urano, Tetsuro Nagai, Susumu Okazaki

J Comput Chem· October 2022

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All-atom molecular dynamics study of hepatitis B virus containing pregenome RNA in solution.
Kazushi Fujimoto, Youhei Yamaguchi, Ryo Urano, Wataru Shinoda, Tetsuya Ishikawa

J Chem Phys· October 2021

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Position-Dependent Diffusion Constant of Molecules in Heterogeneous Systems as Evaluated by the Local Mean Squared Displacement.
Tetsuro Nagai, Shuhei Tsurumaki, Ryo Urano, Kazushi Fujimoto, Wataru Shinoda

J Chem Theory Comput· December 2020

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Characteristics of azole-resistant Aspergillus fumigatus attached to agricultural products imported to Japan.
Yuichiro Nakano, Masato Tashiro, Ryo Urano, Minori Kikuchi, Naoki Ito

J Infect Chemother· October 2020

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Exact long-range Coulombic energy calculation for net charged systems neutralized by uniformly distributed background charge using fast multipole method and its application to efficient free energy calculation.
Ryo Urano, Wataru Shinoda, Noriyuki Yoshii, Susumu Okazaki

J Chem Phys· June 2020

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Aerosol-OT Surfactant Forms Stable Reverse Micelles in Apolar Solvent in the Absence of Water.
Ryo Urano, George A Pantelopulos, John E Straub

J Phys Chem B· March 2019

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Characterization of dynamics and mechanism in the self-assembly of AOT reverse micelles.
Ryo Urano, George A Pantelopulos, Shanshan Song, John E Straub

J Chem Phys· October 2018

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Cellular prion protein targets amyloid-β fibril ends via its C-terminal domain to prevent elongation.
Erin Bove-Fenderson, Ryo Urano, John E Straub, David A Harris

J Biol Chem· October 2017

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Observation of helix associations for insertion of a retinal molecule and distortions of helix structures in bacteriorhodopsin.
Ryo Urano, Yuko Okamoto

J Chem Phys· December 2015

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