Publications by authors named "Sandy Klemm"

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Thymic epithelial cells amplify epigenetic noise to promote immune tolerance.
Noah Gamble, Jason A Caldwell, Joshua McKeever, Caroline Kaiser, Alexandra Bradu, Sandy Klemm

Nature· October 2025

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Sensitive, direct detection of non-coding off-target base editor unwinding and editing in primary cells.
Tong Wang, Selin Jessa, Georgi K Marinov, Sandy Klemm, Anshul Kundaje

bioRxiv· September 2025

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An emergent disease-associated motor neuron state precedes cell death in a mouse model of ALS.
Olivia Gautier, Jacob A Blum, Thao P Nguyen, Sandy Klemm, Mai Yamakawa

bioRxiv· August 2025

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Publisher Correction: PU.1 and BCL11B sequentially cooperate with RUNX1 to anchor mSWI/SNF to poise the T cell effector landscape.
Noah Gamble, Alexandra Bradu, Jason A Caldwell, Joshua McKeever, Olubusayo Bolonduro, Sandy Klemm

Nat Immunol· June 2024

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PU.1 and BCL11B sequentially cooperate with RUNX1 to anchor mSWI/SNF to poise the T cell effector landscape.
Noah Gamble, Alexandra Bradu, Jason A Caldwell, Joshua McKeever, Olubusayo Bolonduro, Sandy Klemm

Nat Immunol· May 2024

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Alleviating Cell Lysate-Induced Inhibition to Enable RT-PCR from Single Cells in Picoliter-Volume Double Emulsion Droplets.
Margarita Khariton, Conor J McClune, Kara K Brower, Sandy Klemm, Elizabeth S Sattely

Anal Chem· January 2023

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Malaria-driven expansion of adaptive-like functional CD56-negative NK cells correlates with clinical immunity to malaria.
Maureen Ty, Shenghuan Sun, Perri C Callaway, John Rek, Kathleen D Press, Sandy Klemm

Sci Transl Med· January 2023

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Single-cell transcriptomic analysis of the adult mouse spinal cord reveals molecular diversity of autonomic and skeletal motor neurons.
Jacob A Blum, Sandy Klemm, Jennifer L Shadrach, Kevin A Guttenplan, Lisa Nakayama

Nat Neurosci· April 2021

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Double emulsion flow cytometry with high-throughput single droplet isolation and nucleic acid recovery.
Kara K Brower, Catherine Carswell-Crumpton, Sandy Klemm, Bianca Cruz, Gaeun Kim

Lab Chip· June 2020

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Single-cell multiomic analysis identifies regulatory programs in mixed-phenotype acute leukemia.
Jeffrey M Granja, Sandy Klemm, Lisa M McGinnis, Arwa S Kathiria, Anja Mezger

Nat Biotechnol· December 2019

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Chromatin accessibility and the regulatory epigenome.
Sandy L Klemm, Zohar Shipony, William J Greenleaf

Nat Rev Genet· April 2019

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High-throughput chromatin accessibility profiling at single-cell resolution.
Anja Mezger, Sandy Klemm, Ishminder Mann, Kara Brower, Alain Mir

Nat Commun· September 2018

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Gene expression. MicroRNA control of protein expression noise.
Jörn M Schmiedel, Sandy L Klemm, Yannan Zheng, Apratim Sahay, Nils Blüthgen

Science· April 2015

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Transcriptional profiling of cells sorted by RNA abundance.
Sandy Klemm, Stefan Semrau, Kay Wiebrands, Dylan Mooijman, Dina A Faddah

Nat Methods· May 2014

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A versatile genome-scale PCR-based pipeline for high-definition DNA FISH.
Magda Bienko, Nicola Crosetto, Leonid Teytelman, Sandy Klemm, Shalev Itzkovitz

Nat Methods· February 2013

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Single-cell expression analyses during cellular reprogramming reveal an early stochastic and a late hierarchic phase.
Yosef Buganim, Dina A Faddah, Albert W Cheng, Elena Itskovich, Styliani Markoulaki, Sandy L Klemm

Cell· September 2012

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Uncovering a macrophage transcriptional program by integrating evidence from motif scanning and expression dynamics.
Stephen A Ramsey, Sandy L Klemm, Daniel E Zak, Kathleen A Kennedy, Vesteinn Thorsson

PLoS Comput Biol· March 2008

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