Publications by authors named "Sarah Filippi"

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Modelling phylogeny in 16S rRNA gene sequencing datasets using string-based kernels.
Jonathan Ish-Horowicz, Sarah Filippi

J Theor Biol· January 2026

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Patterns of Respiratory Symptoms and Asthma Diagnosis in School-Age Children: Three Birth Cohorts.
Alex Cucco, Angela Simpson, Sadia Haider, Clare Murray, Stephen Turner, Sarah Filippi

Allergy· July 2025

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Genomic attributes of airway commensal bacteria and mucosa.
Leah Cuthbertson, Ulrike Löber, Jonathan S Ish-Horowicz, Claire N McBrien, Colin Churchward, Sarah Filippi

Commun Biol· February 2024

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Author Correction: Cardiometabolic and renal phenotypes and transitions in the United States population.
Victor P F Lhoste, Bin Zhou, Anu Mishra, James E Bennett, Sarah Filippi

Nat Cardiovasc Res· January 2024

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Cardiometabolic and renal phenotypes and transitions in the United States population.
Victor P F Lhoste, Bin Zhou, Anu Mishra, James E Bennett, Sarah Filippi

Nat Cardiovasc Res· December 2023

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Automated calibration of consensus weighted distance-based clustering approaches using sharp.
Barbara Bodinier, Dragana Vuckovic, Sabrina Rodrigues, Sarah Filippi, Julien Chiquet

Bioinformatics· November 2023

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Automated calibration for stability selection in penalised regression and graphical models.
Barbara Bodinier, Sarah Filippi, Therese Haugdahl Nøst, Julien Chiquet, Marc Chadeau-Hyam

J R Stat Soc Ser C Appl Stat· November 2023

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Variational Bayes for high-dimensional proportional hazards models with applications within gene expression.
Michael Komodromos, Eric O Aboagye, Marina Evangelou, Sarah Filippi, Kolyan Ray

Bioinformatics· August 2022

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Emulator-based Bayesian optimization for efficient multi-objective calibration of an individual-based model of malaria.
Theresa Reiker, Monica Golumbeanu, Andrew Shattock, Lydia Burgert, Thomas A Smith, Sarah Filippi

Nat Commun· December 2021

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Atopic dermatitis or eczema? Consequences of ambiguity in disease name for biomedical literature mining.
Clément Frainay, Yoann Pitarch, Sarah Filippi, Marina Evangelou, Adnan Custovic

Clin Exp Allergy· September 2021

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Age groups that sustain resurging COVID-19 epidemics in the United States.
Mélodie Monod, Alexandra Blenkinsop, Xiaoyue Xi, Daniel Hebert, Sivan Bershan, Sarah Filippi

Science· March 2021

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State-level tracking of COVID-19 in the United States.
H Juliette T Unwin, Swapnil Mishra, Valerie C Bradley, Axel Gandy, Thomas A Mellan, Sarah L Filippi

Nat Commun· December 2020

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Accelerated MRI-predicted brain ageing and its associations with cardiometabolic and brain disorders.
Arinbjörn Kolbeinsson, Sarah Filippi, Yannis Panagakis, Paul M Matthews, Paul Elliott

Sci Rep· November 2020

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Connectivity patterns between multiple allergen specific IgE antibodies and their association with severe asthma.
Graham Roberts, Sara Fontanella, Anna Selby, Rebecca Howard, Sarah Filippi

J Allergy Clin Immunol· October 2020

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Inference of Multisite Phosphorylation Rate Constants and Their Modulation by Pathogenic Mutations.
Eyan Yeung, Sarah McFann, Lewis Marsh, Emilie Dufresne, Sarah Filippi

Curr Biol· March 2020

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Blood Biomarkers of Sensitization and Asthma.
Hans-Joachim Sonntag, Sarah Filippi, Spyros Pipis, Adnan Custovic

Front Pediatr· June 2019

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An information-theoretic framework for deciphering pleiotropic and noisy biochemical signaling.
Tomasz Jetka, Karol Nienałtowski, Sarah Filippi, Michael P H Stumpf, Michał Komorowski

Nat Commun· November 2018

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Chronic TNFα-driven injury delays cell migration to villi in the intestinal epithelium.
Daniele Muraro, Aimee Parker, Laura Vaux, Sarah Filippi, Axel A Almet

J R Soc Interface· August 2018

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PEITH(Θ): perfecting experiments with information theory in Python with GPU support.
Leander Dony, Jonas Mackerodt, Scott Ward, Sarah Filippi, Michael P H Stumpf

Bioinformatics· April 2018

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Nanog Fluctuations in Embryonic Stem Cells Highlight the Problem of Measurement in Cell Biology.
Rosanna C G Smith, Patrick S Stumpf, Sonya J Ridden, Aaron Sim, Sarah Filippi

Biophys J· June 2017

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The nature and nurture of cell heterogeneity: accounting for macrophage gene-environment interactions with single-cell RNA-Seq.
Quin F Wills, Esther Mellado-Gomez, Rory Nolan, Damien Warner, Eshita Sharma, Sarah Filippi

BMC Genomics· January 2017

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Scalable Bayesian nonparametric measures for exploring pairwise dependence via Dirichlet Process Mixtures.
Sarah Filippi, Chris C Holmes, Luis E Nieto-Barajas

Electron J Stat· November 2016

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Robustness of MEK-ERK Dynamics and Origins of Cell-to-Cell Variability in MAPK Signaling.
Sarah Filippi, Chris P Barnes, Paul D W Kirk, Takamasa Kudo, Katsuyuki Kunida

Cell Rep· June 2016

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Information processing by simple molecular motifs and susceptibility to noise.
Siobhan S Mc Mahon, Oleg Lenive, Sarah Filippi, Michael P H Stumpf

J R Soc Interface· September 2015

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Stem and progenitor cell dysfunction in human trisomies.
Binbin Liu, Sarah Filippi, Anindita Roy, Irene Roberts

EMBO Rep· January 2015

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