Publications by authors named "Saumyadipta Pyne"

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A mathematical framework for human neutrophil state transitions inferred from single-cell RNA sequence data.
Gustaf Wigerblad, Jonathan Carruthers, Sumanta Ray, Thomas Finnie, Grant Lythe, Saumyadipta Pyne

Front Immunol· November 2025

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A mathematical framework for human neutrophil state transitions inferred from single-cell RNA sequence data.
Gustaf Wigerblad, Jonathan Carruthers, Sumanta Ray, Thomas Finnie, Grant Lythe, Saumyadipta Pyne

bioRxiv· July 2025

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Disaggregation of Green Space Access, Walkability, and Behavioral Risk Factor Data for Precise Estimation of Local Population Characteristics.
Saurav Guha, Michael Alonzo, Pierre Goovaerts, LuAnn L Brink, Meghana Ray, Saumyadipta Pyne

Int J Environ Res Public Health· June 2024

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Focused analysis of RNFL decay in glaucomatous eyes using circular statistics on high-resolution OCT data.
Md Hasnat Ali, Meghana Ray, S Rao Jammalamadaka, Sirisha Senthil, M B Srinivas, Saumyadipta Pyne

PLoS One· October 2023

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Geographically weighted linear combination test for gene-set analysis of a continuous spatial phenotype as applied to intratumor heterogeneity.
Payam Amini, Morteza Hajihosseini, Saumyadipta Pyne, Irina Dinu

Front Cell Dev Biol· March 2023

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Food insecurity in the Eastern Indo-Gangetic plain: Taking a closer look.
Saumyadipta Pyne, Saurav Guha, Sumonkanti Das, Meghana Ray, Hukum Chandra

PLoS One· January 2023

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Re-scaling and small area estimation of behavioral risk survey guided by social vulnerability data.
Shaina L Stacy, Hukum Chandra, Saurav Guha, Raanan Gurewitsch, Lu Ann L Brink, Saumyadipta Pyne

BMC Public Health· January 2023

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Systematic mining of patterns of polysubstance use in a nationwide population survey.
Sumanta Ray, Meghana Desai, Saumyadipta Pyne

Comput Biol Med· December 2022

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Geostatistical Modeling and Heterogeneity Analysis of Tumor Molecular Landscape.
Morteza Hajihosseini, Payam Amini, Dan Voicu, Irina Dinu, Saumyadipta Pyne

Cancers (Basel)· October 2022

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Circular functional analysis of OCT data for precise identification of structural phenotypes in the eye.
Md Hasnat Ali, Brian Wainwright, Alexander Petersen, Ganesh B Jonnadula, Meghana Desai, Saumyadipta Pyne

Sci Rep· December 2021

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Determination of critical community size from an HIV/AIDS model.
Sarmistha Das, Pramit Ghosh, Sandip Banerjee, Saumyadipta Pyne, Joydev Chattopadhyay

PLoS One· May 2021

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Differential Patterns of Social Media Use Associated with Loneliness and Health Outcomes in Selected Socioeconomic Groups.
Pedram Gharani, Sumanta Ray, Meghana Aruru, Saumyadipta Pyne

J Technol Behav Sci· May 2021

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Multivariate Tail Probabilities: Predicting Regional Pertussis Cases in Washington State.
Xuze Zhang, Saumyadipta Pyne, Benjamin Kedem

Entropy (Basel)· May 2021

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Clustering Patterns Connecting COVID-19 Dynamics and Human Mobility Using Optimal Transport.
Frank Nielsen, Gautier Marti, Sumanta Ray, Saumyadipta Pyne

Sankhya B (2008)· March 2021

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Protocol for a cluster randomised trial evaluating a multifaceted intervention starting preconceptionally-Early Interventions to Support Trajectories for Healthy Life in India (EINSTEIN): a Healthy Life Trajectories Initiative (HeLTI) Study.
Kalyanaraman Kumaran, Ghattu V Krishnaveni, Kumar Gavali Suryanarayana, Manohar Prabhu Prasad, Antonisamy Belavendra, Saumyadipta Pyne

BMJ Open· February 2021

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Estimation of Tail Probabilities by Repeated Augmented Reality.
Benjamin Kedem, Saumyadipta Pyne

J Stat Theory Pract· January 2021

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High-speed automatic characterization of rare events in flow cytometric data.
Yuan Qi, Youhan Fang, David R Sinclair, Shangqin Guo, Meritxell Alberich-Jorda, Saumyadipta Pyne

PLoS One· April 2020

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Single-Cell Transcriptional Profiling of Cells Derived From Regenerating Alveolar Ducts.
Alexandra B Ysasi, Robert D Bennett, Willi Wagner, Cristian D Valenzuela, Andrew B Servais, Saumyadipta Pyne

Front Med (Lausanne)· April 2020

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Gene set analysis and reduction for a continuous phenotype: Identifying markers of birth weight variation based on embryonic stem cells and immunologic signatures.
Shabnam Vatanpour, Saumyadipta Pyne, Ana Paula Leite, Irina Dinu

Comput Biol Med· October 2019

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Association between bivariate expression of key oncogenes and metabolic phenotypes of patients with prostate cancer.
Elham Khodayari Moez, Saumyadipta Pyne, Irina Dinu

Comput Biol Med· December 2018

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Potentially important miRNAs in enteropathy-associated T-cell lymphoma pathogenesis: A pilot study.
Lindsey Clarke, Raju Sr Adduri, Paul Smyth, Fiona Quinn, Michael Jeffers, Saumyadipta Pyne

Leuk Res Rep· October 2018

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Ca/nuclear factor of activated T cells signaling is enriched in early-onset rectal tumors devoid of canonical Wnt activation.
Raju Kumar, Ratheesh Raman, Viswakalyan Kotapalli, Swarnalata Gowrishankar, Saumyadipta Pyne

J Mol Med (Berl)· February 2018

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A brief review of single-cell transcriptomic technologies.
Tomer Kalisky, Sarit Oriel, Tali Hana Bar-Lev, Nissim Ben-Haim, Ariel Trink, Saumyadipta Pyne

Brief Funct Genomics· January 2018

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Gene-Set Reduction for Analysis of Major and Minor Gleason Scores Based on Differential Gene-Set Expressions and Biological Pathways in Prostate Cancer.
Irina Dinu, Surya Poudel, Saumyadipta Pyne

Cancer Inform· September 2017

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Partial identification in the statistical matching problem.
Daniel Ahfock, Saumyadipta Pyne, Sharon X Lee, Geoffrey J McLachlan

Comput Stat Data Anal· December 2016

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