Publications by authors named "Sebastian Ramos-Onsins"

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npstat: An Efficient Tool to Explore the Population Genome Variability and Divergence Using Pool Sequencing Data.
Sebastian E Ramos-Onsins, Sara Guirao-Rico, Ahmed Hafez, Luca Ferretti

Methods Mol Biol· August 2025

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Footprints of Worldwide Adaptation in Structured Populations of Drosophila melanogaster Through the Expanded DEST 2.0 Genomic Resource.
Joaquin C B Nunez, Marta Coronado-Zamora, Mathieu Gautier, Martin Kapun, Sonja Steindl, Sebastian E Ramos-Onsins

Mol Biol Evol· July 2025

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Detection of domestication signals through the analysis of the full distribution of fitness effects.
David Castellano, Ioanna-Theoni Vourlaki, Ryan N Gutenkunst, Sebastian E Ramos-Onsins

Peer Community J· March 2025

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Evaluation of deep learning for predicting rice traits using structural and single-nucleotide genomic variants.
Ioanna-Theoni Vourlaki, Sebastián E Ramos-Onsins, Miguel Pérez-Enciso, Raúl Castanera

Plant Methods· August 2024

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Whole genome scanning of a Mediterranean basin hotspot collection provides new insights into olive tree biodiversity and biology.
Christos Bazakos, Konstantinos G Alexiou, Sebastián Ramos-Onsins, Georgios Koubouris, Nikolaos Tourvas

Plant J· October 2023

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Copy Number Variation on Loci Affects the Diversity and Composition of the Fecal Microbiota in Pigs.
Yuliaxis Ramayo-Caldas, Daniel Crespo-Piazuelo, Jordi Morata, Olga González-Rodríguez, Cristina Sebastià, Sebastian Ramos-Onsins

Microbiol Spectr· August 2023

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A General Framework for Neutrality Tests Based on the Site Frequency Spectrum.
Sebastián E Ramos-Onsins, Giacomo Marmorini, Guillaume Achaz, Luca Ferretti

Genes (Basel)· August 2023

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Development and Evaluation of an Axiom 60K SNP Array for Almond ().
Henri Duval, Eva Coindre, Sebastian E Ramos-Onsins, Konstantinos G Alexiou, Maria J Rubio-Cabetas

Plants (Basel)· January 2023

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Transposable element polymorphisms improve prediction of complex agronomic traits in rice.
Ioanna-Theoni Vourlaki, Raúl Castanera, Sebastián E Ramos-Onsins, Josep M Casacuberta, Miguel Pérez-Enciso

Theor Appl Genet· September 2022

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Polygenic adaptation of rosette growth in Arabidopsis thaliana.
Benedict Wieters, Kim A Steige, Fei He, Evan M Koch, Sebastián E Ramos-Onsins

PLoS Genet· January 2021

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Genomic Diversity and Evolution of Quasispecies in Newcastle Disease Virus Infections.
Archana Jadhav, Lele Zhao, Weiwei Liu, Chan Ding, Venugopal Nair, Sebastian E Ramos-Onsins

Viruses· November 2020

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The Identification of Runs of Homozygosity Gives a Focus on the Genetic Diversity and Adaptation of the "Charolais de Cuba" Cattle.
Yoel Rodríguez-Valera, Dominique Rocha, Michel Naves, Gilles Renand, Eliecer Pérez-Pineda, Sebastian E Ramos-Onsins

Animals (Basel)· November 2020

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The Site Frequency/Dosage Spectrum of Autopolyploid Populations.
Luca Ferretti, Paolo Ribeca, Sebastian E Ramos-Onsins

Front Genet· October 2018

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The neutral frequency spectrum of linked sites.
Luca Ferretti, Alexander Klassmann, Emanuele Raineri, Sebastián E Ramos-Onsins, Thomas Wiehe

Theor Popul Biol· September 2018

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Genetic diversity and selection signatures of the beef 'Charolais de Cuba' breed.
Yoel Rodriguez-Valera, Gilles Renand, Michel Naves, Yidix Fonseca-Jiménez, Teresa Inés Moreno-Probance, Sebastian Ramos-Onsins

Sci Rep· July 2018

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The Evolutionary Consequences of Transposon-Related Pericentromer Expansion in Melon.
Jordi Morata, Marc Tormo, Konstantinos G Alexiou, Cristina Vives, Sebastián E Ramos-Onsins

Genome Biol Evol· June 2018

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Porcine Y-chromosome variation is consistent with the occurrence of paternal gene flow from non-Asian to Asian populations.
Sara Guirao-Rico, Oscar Ramirez, Ana Ojeda, Marcel Amills, Sebastian E Ramos-Onsins

Heredity (Edinb)· January 2018

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DnaSP 6: DNA Sequence Polymorphism Analysis of Large Data Sets.
Julio Rozas, Albert Ferrer-Mata, Juan Carlos Sánchez-DelBarrio, Sara Guirao-Rico, Pablo Librado, Sebastián E Ramos-Onsins

Mol Biol Evol· December 2017

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Decomposing the Site Frequency Spectrum: The Impact of Tree Topology on Neutrality Tests.
Luca Ferretti, Alice Ledda, Thomas Wiehe, Guillaume Achaz, Sebastian E Ramos-Onsins

Genetics· September 2017

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Optimized Next-Generation Sequencing Genotype-Haplotype Calling for Genome Variability Analysis.
Javier Navarro, Bruno Nevado, Porfidio Hernández, Gonzalo Vera, Sebastián E Ramos-Onsins

Evol Bioinform Online· August 2017

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Approaching Long Genomic Regions and Large Recombination Rates with msParSm as an Alternative to MaCS.
Carlos Montemuiño, Antonio Espinosa, Juan C Moure, Gonzalo Vera, Porfidio Hernández, Sebastián Ramos-Onsins

Evol Bioinform Online· October 2016

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Identification of protein-damaging mutations in 10 swine taste receptors and 191 appetite-reward genes.
Alex Clop, Abdoallah Sharaf, Anna Castelló, Sebastián Ramos-Onsins, Susanna Cirera

BMC Genomics· August 2016

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A deep catalog of autosomal single nucleotide variation in the pig.
Erica Bianco, Bruno Nevado, Sebastián E Ramos-Onsins, Miguel Pérez-Enciso

PLoS One· December 2015

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Transposon Insertions, Structural Variations, and SNPs Contribute to the Evolution of the Melon Genome.
Walter Sanseverino, Elizabeth Hénaff, Cristina Vives, Sara Pinosio, William Burgos-Paz, Sebastián E Ramos-Onsins

Mol Biol Evol· October 2015

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On genetic differentiation between domestic pigs and Tibetan wild boars.
Miguel Pérez-Enciso, William Burgos-Paz, Sebastián E Ramos-Onsins

Nat Genet· March 2015

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