Publications by authors named "Shwu-Fan Ma"

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Associations of interstitial lung disease subtype and CT pattern with lung function and survival.
John S Kim, Janelle Pugashetti, Shwu-Fan Ma, Yong Huang, Anna J Podolanczuk, Ani Manichaikul, Fernando J Martinez

Thorax· November 2025

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Associations of High Attenuation Area-Related Proteomic Biomarkers with Fibrotic or Subpleural Interstitial Lung Abnormalities.
John S Kim, Catherine L Debban, Daniel E Guzman, Riley T Hannan, Mary Salvatore, Shwu-Fan Ma, Eric A Hoffman, Ani Manichaikul

Am J Respir Crit Care Med· October 2025

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Sex-specific genetic effects on susceptibility to idiopathic pulmonary fibrosis.
Olivia C Leavy, Anne F Goemans, Tamara Hernandez-Beeftink, Amy D Stockwell, Richard J Allen, Shwu-Fan Ma, Maria Molina-Molina, Margaret Neighbors, Mary E Strek, Martin D Tobin, Toby M Maher, Fernando Martinez

ERJ Open Res· September 2025

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Proteomic Biomarkers of Survival in Non-Idiopathic Pulmonary Fibrosis Interstitial Lung Disease.
Shehabaldin Alqalyoobi, Jennifer A Smith, Manoj V Maddali, Janelle Vu Pugashetti, Chad A Newton, Shwu-Fan Ma, Mary E Strek, Fernando J Martinez

Am J Respir Crit Care Med· August 2025

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Rare variants and survival of patients with idiopathic pulmonary fibrosis: analysis of a multicentre, observational cohort study with independent validation.
Aitana Alonso-González, David Jáspez, José M Lorenzo-Salazar, Shwu-Fan Ma, Emma Strickland, Toby M Maher, Fernando J Martinez

Lancet Respir Med· June 2025

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Mosaic loss of chromosome Y in blood is associated with male susceptibility for idiopathic pulmonary fibrosis.
Josefin Bjurling, Nicholas W Chavkin, Jonatan Halvardson, Mark C Thel, Jonas Mattisson, Ammar Zaghlool, Shwu-Fan Ma, Fernando J Martinez

Commun Med (Lond)· June 2025

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Genome-wide association study of Idiopathic Pulmonary Fibrosis susceptibility using clinically-curated European-ancestry datasets.
Daniel Chin, Tamara Hernandez-Beeftink, Lauren Donoghue, Beatriz Guillen-Uio, Olivia C Leavy, Shwu-Fan Ma, Mark McCarthy, Toby M Maher, Maria Molina-Molina, Margaret Neighbors, Mary E Strek, Martin D Tobin, Maria C Zarcone, Fernando Martinez

medRxiv· February 2025

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Rare variants and survival of patients with idiopathic pulmonary fibrosis.
Aitana Alonso-Gonzalez, David Jáspez, José M Lorenzo-Salazar, Shwu-Fan Ma, Emma Strickland, Toby M Maher, Fernando J Martinez

medRxiv· October 2024

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Transcriptome-Wide Association Study of Idiopathic Pulmonary Fibrosis Survival Identifies and .
Xiaowei Hu, John S Kim, Aabida Saferali, Yong Huang, Shwu-Fan Ma, Ani Manichaikul

Am J Respir Crit Care Med· September 2024

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Reply to van der Sar : Classifying Interstitial Lung Disease: Omics Are in the Air.
Yong Huang, Shwu-Fan Ma, Imre Noth

Am J Respir Crit Care Med· September 2024

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Biological Age, Chronological Age, and Survival in Pulmonary Fibrosis: A Causal Mediation Analysis.
Janelle Vu Pugashetti, John S Kim, Swaraj Bose, Ayodeji Adegunsoye, Angela L Linderholm, Mary E Strek, Shwu-Fan Ma, Fernando J Martinez

Am J Respir Crit Care Med· September 2024

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Machine Learning of Plasma Proteomics Classifies Diagnosis of Interstitial Lung Disease.
Yong Huang, Shwu-Fan Ma, Justin M Oldham, Ayodeji Adegunsoye, Daisy Zhu, Emma Strickland, Hannah Mannem, Toby M Maher, Mary E Strek, Fernando J Martinez

Am J Respir Crit Care Med· August 2024

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SNP and Antimicrobial Treatment Effect in Idiopathic Pulmonary Fibrosis.
William Whalen, Kristin Berger, John S Kim, Will Simmons, Shwu-Fan Ma, Fernando J Martinez, Toby M Maher, Matthew Hammond

Am J Respir Crit Care Med· August 2024

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Molecular Endotypes of Idiopathic Pulmonary Fibrosis: A Latent Class Analysis of Two Multicenter Observational Cohorts.
Manoj V Maddali, Andrew R Moore, Pratik Sinha, Chad A Newton, John S Kim, Shwu-Fan Ma, Mary E Strek, Rachel L Zemans, Fernando J Martinez

Am J Respir Crit Care Med· August 2024

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A multidimensional classifier to support lung transplant referral in patients with pulmonary fibrosis.
Janelle Vu Pugashetti, John S Kim, Michael P Combs, Shwu-Fan Ma, Ayodeji Adegunsoye, Mary E Strek, Fernando J Martinez

J Heart Lung Transplant· July 2024

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Proteomic Biomarkers of Survival in Idiopathic Pulmonary Fibrosis.
Justin M Oldham, Yong Huang, Swaraj Bose, Shwu-Fan Ma, John S Kim, Mary E Strek, Rachel L Zemans, Fernando J Martinez

Am J Respir Crit Care Med· May 2024

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Commensal Oral Microbiota, Disease Severity, and Mortality in Fibrotic Lung Disease.
David N O'Dwyer, John S Kim, Shwu-Fan Ma, Piyush Ranjan, Promi Das, Fernando J Martinez

Am J Respir Crit Care Med· May 2024

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Associations of Plasma Omega-3 Fatty Acids With Progression and Survival in Pulmonary Fibrosis.
John S Kim, Shwu-Fan Ma, Jennie Z Ma, Yong Huang, Catherine A Bonham, Mary E Strek, Emma Strickland, Krishnarao Maddipati

Chest· March 2024

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High-dimensional comparison of monocytes and T cells in post-COVID and idiopathic pulmonary fibrosis.
Grace C Bingham, Lyndsey M Muehling, Chaofan Li, Yong Huang, Shwu-Fan Ma, Thomas H Barker

Front Immunol· February 2024

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Cooperation between PRMT1 and PRMT6 drives lung cancer health disparities among Black/African American men.
Pei-Ying Wu, Michelle Van Scoyk, Stephanie S McHale, Chu-Fang Chou, Gregory Riddick, Shwu-Fan Ma

iScience· February 2024

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Genome-wide SNP-sex interaction analysis of susceptibility to idiopathic pulmonary fibrosis.
Olivia C Leavy, Anne F Goemans, Amy D Stockwell, Richard J Allen, Beatriz Guillen-Guio, Tamara Hernandez-Beeftink, Shwu-Fan Ma, Maria Molina-Molina, Margaret Neighbors, Mary E Strek, Martin D Tobin, Toby M Maher, Fernando Martinez

medRxiv· January 2024

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Association study of human leukocyte antigen variants and idiopathic pulmonary fibrosis.
Beatriz Guillen-Guio, Megan L Paynton, Richard J Allen, Daniel P W Chin, Lauren J Donoghue, Tamara Hernandez-Beeftink, Fernando Martinez, Martin D Tobin, Shwu-Fan Ma, Mary E Strek, Maria Molina-Molina, Margaret Neighbors, Toby M Maher

ERJ Open Res· January 2024

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Telomere length and immunosuppression in non-idiopathic pulmonary fibrosis interstitial lung disease.
David Zhang, Ayodeji Adegunsoye, Justin M Oldham, Julia Kozlitina, Nicole Garcia, Maria Poonawalla, Shwu-Fan Ma, Mary E Strek

Eur Respir J· November 2023

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Association study of human leukocyte antigen (HLA) variants and idiopathic pulmonary fibrosis.
Beatriz Guillen-Guio, Megan L Paynton, Richard J Allen, Daniel P W Chin, Lauren J Donoghue, Tamara Hernandez-Beeftink, Fernando Martinez, Martin D Tobin, Ma Shwu-Fan, Mary E Strek, Maria Molina-Molina, Margaret Neighbors, Toby M Maher

medRxiv· July 2023

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Telomere length associates with chronological age and mortality across racially diverse pulmonary fibrosis cohorts.
Ayodeji Adegunsoye, Chad A Newton, Justin M Oldham, Brett Ley, Cathryn T Lee, Shwu-Fan Ma, Fernando J Martinez, Mary E Strek

Nat Commun· March 2023

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