Publications by authors named "Sri D Appasamy"

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PDBe: enhanced structural data exploration to facilitate discovery.
Marcelo Querino Lima Afonso, Ivanna Pidruchna, Sreenath Nair, Adam Midlik, Dare Lawal, Sri Devan Appasamy

Nucleic Acids Res· December 2025

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R2DT: a comprehensive platform for visualizing RNA secondary structure.
Holly McCann, Caeden D Meade, Loren Dean Williams, Anton S Petrov, Philip Z Johnson, Sri Devan Appasamy

Nucleic Acids Res· February 2025

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R3DMCS: a web server for visualizing structural variation in RNA motifs across experimental 3D structures from the same organism or across species.
Sri Devan Appasamy, Craig L Zirbel

Bioinformatics· November 2024

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R2DT: A COMPREHENSIVE PLATFORM FOR VISUALISING RNA SECONDARY STRUCTURE.
Holly McCann, Caeden D Meade, Loren Dean Williams, Anton S Petrov, Philip Z Johnson, Sri Devan Appasamy

bioRxiv· September 2024

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Annotating Macromolecular Complexes in the Protein Data Bank: Improving the FAIRness of Structure Data.
Sri Devan Appasamy, John Berrisford, Romana Gaborova, Sreenath Nair, Stephen Anyango

Sci Data· December 2023

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PDBe and PDBe-KB: Providing high-quality, up-to-date and integrated resources of macromolecular structures to support basic and applied research and education.
Mihaly Varadi, Stephen Anyango, Sri Devan Appasamy, David Armstrong, Marcus Bage

Protein Sci· October 2022

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Regulation of Glycine Cleavage and Detoxification by a Highly Conserved Glycine Riboswitch in Burkholderia spp.
Noor Munyati-Othman, Sri D Appasamy, Nadzirah Damiri, Reeki Emrizal, Norfarrah Mohamed Alipiah

Curr Microbiol· August 2021

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InterRNA: a database of base interactions in RNA structures.
Sri Devan Appasamy, Hazrina Yusof Hamdani, Effirul Ikhwan Ramlan, Mohd Firdaus-Raih

Nucleic Acids Res· January 2016

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Comparative sequence and structure analysis reveals the conservation and diversity of nucleotide positions and their associated tertiary interactions in the riboswitches.
Sri D Appasamy, Effirul Ikhwan Ramlan, Mohd Firdaus-Raih

PLoS One· June 2014

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NASSAM: a server to search for and annotate tertiary interactions and motifs in three-dimensional structures of complex RNA molecules.
Hazrina Y Hamdani, Sri D Appasamy, Peter Willett, Peter J Artymiuk, Mohd Firdaus-Raih

Nucleic Acids Res· July 2012

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