Publications by authors named "Stuart C Sealfon"

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Regulation of murine follicle-stimulating hormone β subunit transcription by newly identified enhancers.
Yangfan Jin, Hailey Schultz, Luisina Ongaro, Gauthier Schang, Xiang Zhou, Stuart C Sealfon

bioRxiv· November 2025

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Innate immune molecular landscape following controlled human influenza virus infection.
William Thistlethwaite, Sindhu Vangeti, Wan-Sze Cheng, Pankaj Agarwal, Antonio Cappuccio, Stuart C Sealfon

Cell Rep· October 2025

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Heterogeneous Macrophage Activation in Acute Skeletal Muscle Sterile Injury and Model of Muscular Dystrophy.
Xingyu Wang, Justin K Moy, Yinhang Wang, Gregory R Smith, Frederique Ruf-Zamojski, Stuart C Sealfon

Int J Mol Sci· August 2025

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Integrated single-cell multiome analysis reveals muscle fiber-type gene regulatory circuitry modulated by endurance exercise.
Aliza B Rubenstein, Gregory R Smith, Zidong Zhang, Xi Chen, Toby L Chambers, Stuart C Sealfon

Genome Res· July 2025

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Comprehensive guide for epigenetics and transcriptomics data quality control.
Arianna Comendul, Frederique Ruf-Zamojski, Colby T Ford, Pankaj Agarwal, Elena Zaslavsky, Stuart C Sealfon

STAR Protoc· March 2025

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Genetics and Environment Distinctively Shape the Human Immune Cell Epigenome.
Wenliang Wang, Manoj Hariharan, Wubin Ding, Anna Bartlett, Cesar Barragan, Stuart C Sealfon

bioRxiv· January 2025

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Design, fabrication, and calibration of a micromachined thermocouple for biological applications in temperature monitoring.
Onnop Srivannavit, Rakesh Joshi, Weibin Zhu, Bin Gong, Irene C Turnbull, Stuart C Sealfon

Biosens Bioelectron· January 2025

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Muscle-derived myostatin is a major endocrine driver of follicle-stimulating hormone synthesis.
Luisina Ongaro, Xiang Zhou, Ying Wang, Hailey Schultz, Ziyue Zhou, Stuart C Sealfon

Science· January 2025

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Clinical and functional assessment of SARS-CoV-2 sequelae among young marines - a panel study.
Chad K Porter, Charmagne G Beckett, Elizabeth Cooper, Lindsey White, David Wallace, Stuart C Sealfon

Lancet Reg Health Am· November 2024

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Automated single-cell omics end-to-end framework with data-driven batch inference.
Yuan Wang, William Thistlethwaite, Alicja Tadych, Frederique Ruf-Zamojski, Daniel J Bernard, Stuart C Sealfon

Cell Syst· October 2024

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Molecular Transducers of Physical Activity Consortium (MoTrPAC): human studies design and protocol.

J Appl Physiol (1985)· September 2024

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Integrated epigenomic exposure signature discovery.
Jared Schuetter, Angela Minard-Smith, Brandon Hill, Jennifer L Beare, Alexandria Vornholt, Stuart C Sealfon

Epigenomics· September 2024

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Automated single-cell omics end-to-end framework with data-driven batch inference.
Yuan Wang, William Thistlethwaite, Alicja Tadych, Frederique Ruf-Zamojski, Daniel J Bernard, Stuart C Sealfon

bioRxiv· June 2024

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Protocol for high-throughput DNA methylation profiling in rat tissues using automated reduced representation bisulfite sequencing.
Venugopalan D Nair, Hanna Pincas, Mary Anne S Amper, Yongchao Ge, Mital Vasoya, Stuart C Sealfon

STAR Protoc· June 2024

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Molecular adaptations in response to exercise training are associated with tissue-specific transcriptomic and epigenomic signatures.
Venugopalan D Nair, Hanna Pincas, Gregory R Smith, Elena Zaslavsky, Yongchao Ge, Stuart C Sealfon

Cell Genom· June 2024

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Fast and slow muscle fiber transcriptome dynamics with lifelong endurance exercise.
Ulrika Raue, Gwenaelle Begue, Kiril Minchev, Bozena Jemiolo, Kevin J Gries, Stuart C Sealfon

J Appl Physiol (1985)· February 2024

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Peak-agnostic high-resolution cis-regulatory circuitry mapping using single cell multiome data.
Zidong Zhang, Frederique Ruf-Zamojski, Michel Zamojski, Daniel J Bernard, Xi Chen, Stuart C Sealfon

Nucleic Acids Res· January 2024

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Deep phenotyping of the lipidomic response in COVID-19 and non-COVID-19 sepsis.
Hu Meng, Arjun Sengupta, Emanuela Ricciotti, Antonijo Mrčela, Divij Mathew, Stuart C Sealfon

Clin Transl Med· November 2023

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Integrated single-cell multiome analysis reveals muscle fiber-type gene regulatory circuitry modulated by endurance exercise.
Aliza B Rubenstein, Gregory R Smith, Zidong Zhang, Xi Chen, Toby L Chambers, Stuart C Sealfon

bioRxiv· October 2023

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Author Correction: Mapping disease regulatory circuits at cell-type resolution from single-cell multiomics data.
Xi Chen, Yuan Wang, Antonio Cappuccio, Wan-Sze Cheng, Frederique Ruf Zamojski, Stuart C Sealfon

Nat Comput Sci· September 2023

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Mapping disease regulatory circuits at cell-type resolution from single-cell multiomics data.
Xi Chen, Yuan Wang, Antonio Cappuccio, Wan-Sze Cheng, Frederique Ruf Zamojski, Stuart C Sealfon

Nat Comput Sci· July 2023

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Deep Phenotyping of the Lipidomic Response in COVID and non-COVID Sepsis.
Hu Meng, Arjun Sengupta, Emanuela Ricciotti, Antonijo Mrčela, Divij Mathew, Stuart C Sealfon

bioRxiv· June 2023

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A methylation clock model of mild SARS-CoV-2 infection provides insight into immune dysregulation.
Weiguang Mao, Clare M Miller, Venugopalan D Nair, Yongchao Ge, Mary Anne S Amper, Rachel S G Sealfon, Stuart C Sealfon

Mol Syst Biol· May 2023

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Activating Transcription Factor 3 Stimulates Follicle-Stimulating Hormone-β Expression In Vitro But Is Dispensable for Follicle-Stimulating Hormone Production in Murine Gonadotropes In Vivo.
Carlos A I Alonso, Caroline D David, Chirine Toufaily, Ying Wang, Xiang Zhou, Stuart C Sealfon

Endocrinology· March 2023

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Blood RNA alternative splicing events as diagnostic biomarkers for infectious disease.
Zijun Zhang, Natalie Sauerwald, Antonio Cappuccio, Irene Ramos, Venugopalan D Nair, Stuart C Sealfon

Cell Rep Methods· February 2023

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