Publications by authors named "Tapsi Kumar"

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Deep sequencing of candidate genes identified 14 variants associated with smoking abstinence in an ethnically diverse sample.
Paul M Cinciripini, David W Wetter, Jian Wang, Robert Yu, George Kypriotakis, Tapsi Kumar

Sci Rep· March 2024

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A spatially resolved single-cell genomic atlas of the adult human breast.
Tapsi Kumar, Kevin Nee, Runmin Wei, Siyuan He, Quy H Nguyen

Nature· August 2023

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Archival single-cell genomics reveals persistent subclones during DCIS progression.
Kaile Wang, Tapsi Kumar, Junke Wang, Darlan Conterno Minussi, Emi Sei

Cell· August 2023

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A spatially resolved single cell genomic atlas of the adult human breast.
Tapsi Kumar, Kevin Nee, Runmin Wei, Siyuan He, Quy H Nguyen

bioRxiv· April 2023

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Comprehensive multiplexed immune profiling of the ductal carcinoma in situ immune microenvironment regarding subsequent ipsilateral invasive breast cancer risk.
Mathilde M Almekinders, Tycho Bismeijer, Tapsi Kumar, Fei Yang, Bram Thijssen

Br J Cancer· October 2022

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Single-Cell Sequencing Reveals Trajectory of Tumor-Infiltrating Lymphocyte States in Pancreatic Cancer.
Aislyn Schalck, Donastas Sakellariou-Thompson, Marie-Andrée Forget, Emi Sei, Tara G Hughes, Tapsi Kumar

Cancer Discov· October 2022

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Tumor Immune Microenvironment Changes by Multiplex Immunofluorescence Staining in a Pilot Study of Neoadjuvant Talazoparib for Early-Stage Breast Cancer Patients with a Hereditary BRCA Mutation.
Tapsi Kumar, Evie Hobbs, Fei Yang, Jeffrey T Chang, Alejandro Contreras

Clin Cancer Res· September 2022

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Genomic analysis defines clonal relationships of ductal carcinoma in situ and recurrent invasive breast cancer.
Esther H Lips, Tapsi Kumar, Anargyros Megalios, Lindy L Visser, Michael Sheinman

Nat Genet· June 2022

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Delineating copy number and clonal substructure in human tumors from single-cell transcriptomes.
Ruli Gao, Shanshan Bai, Ying C Henderson, Yiyun Lin, Aislyn Schalck, Tapsi Kumar

Nat Biotechnol· May 2021

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SCMarker: Ab initio marker selection for single cell transcriptome profiling.
Fang Wang, Shaoheng Liang, Tapsi Kumar, Nicholas Navin, Ken Chen

PLoS Comput Biol· October 2019

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Pre-existing Functional Heterogeneity of Tumorigenic Compartment as the Origin of Chemoresistance in Pancreatic Tumors.
Sahil Seth, Chieh-Yuan Li, I-Lin Ho, Denise Corti, Sara Loponte, Tapsi Kumar

Cell Rep· February 2019

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