Publications by authors named "Thomas Lengauer"

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Current methods for detecting and assessing HIV-1 antibody resistance.
Stanley Odidika, Martin Pirkl, Thomas Lengauer, Philipp Schommers

Front Immunol· May 2025

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Biological databases in the age of generative artificial intelligence.
Mihai Pop, Teresa K Attwood, Judith A Blake, Philip E Bourne, Ana Conesa, Thomas Lengauer

Bioinform Adv· March 2025

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Hepatitis C Virus Saint Petersburg Variant Detection With Machine Learning Methods.
Nurhan Arslan, Bernhard Reuter, Joachim Buech, Thomas Lengauer, Martin Obermeier

J Med Virol· February 2025

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Torque Teno Virus Load Is Associated With Centers for Disease Control and Prevention Stage and CD4+ Cell Count in People Living With Human Immunodeficiency Virus but Seems Unrelated to AIDS-Defining Events and Human Pegivirus Load.
Pia L Esser, Gibran H Rubio Quintanares, Bettina Langhans, Eva Heger, Michael Böhm, Thomas Lengauer

J Infect Dis· August 2024

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Incorporating temporal dynamics of mutations to enhance the prediction capability of antiretroviral therapy's outcome for HIV-1.
Giulia Di Teodoro, Martin Pirkl, Francesca Incardona, Ilaria Vicenti, Anders Sönnerborg, Thomas Lengauer

Bioinformatics· June 2024

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Yves Moreau has received the 2023 Einstein Foundation Individual Award for Promoting Quality in Research.
Thomas Lengauer

Bioinform Adv· March 2024

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Geno2pheno: recombination detection for HIV-1 and HEV subtypes.
Martin Pirkl, Joachim Büch, Georg Friedrich, Michael Böhm, Dan Turner, Thomas Lengauer

NAR Mol Med· January 2024

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Cohort Profile: A European Multidisciplinary Network for the Fight against HIV Drug Resistance (EuResist Network).
Barbara Rossetti, Francesca Incardona, Giulia Di Teodoro, Chiara Mommo, Francesco Saladini, Thomas Lengauer

Trop Med Infect Dis· April 2023

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Analysis of mutational history of multidrug-resistant genotypes with a mutagenetic tree model.
Martin Pirkl, Joachim Büch, Carole Devaux, Michael Böhm, Anders Sönnerborg, Thomas Lengauer

J Med Virol· January 2023

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Respiratory viruses dynamics and interactions: ten years of surveillance in central Europe.
Gibran Horemheb-Rubio, Ralf Eggeling, Norbert Schmeiβer, Nico Pfeifer, Thomas Lengauer

BMC Public Health· June 2022

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Iris Antes 1969-2021.
Aphrodite Kapurniotu, Thomas Lengauer

Bioinform Adv· May 2022

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Identification of tissue-specific and common methylation quantitative trait loci in healthy individuals using MAGAR.
Michael Scherer, Gilles Gasparoni, Souad Rahmouni, Tatiana Shashkova, Marion Arnoux, Thomas Lengauer

Epigenetics Chromatin· September 2021

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Rhinovirus prevalence as indicator for efficacy of measures against SARS-CoV-2.
Simo Kitanovski, Gibran Horemheb-Rubio, Ortwin Adams, Barbara Gärtner, Thomas Lengauer

BMC Public Health· June 2021

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Editorial.
Alex Bateman, Thomas Lengauer

Bioinform Adv· May 2021

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Reference-free deconvolution, visualization and interpretation of complex DNA methylation data using DecompPipeline, MeDeCom and FactorViz.
Michael Scherer, Petr V Nazarov, Reka Toth, Shashwat Sahay, Tony Kaoma, Thomas Lengauer

Nat Protoc· October 2020

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Corrigendum to: Family-joining: A fast distance-based method for constructing generally labeled trees.
Prabhav Kalaghatgi, Nico Pfeifer, Thomas Lengauer

Mol Biol Evol· June 2020

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Quantitative comparison of within-sample heterogeneity scores for DNA methylation data.
Michael Scherer, Almut Nebel, Andre Franke, Jörn Walter, Thomas Lengauer

Nucleic Acids Res· May 2020

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Clinical use, efficacy, and durability of maraviroc for antiretroviral therapy in routine care: A European survey.
Andrea De Luca, Patrizio Pezzotti, Charles Boucher, Matthias Döring, Francesca Incardona, Thomas Lengauer

PLoS One· March 2020

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Unique and assay specific features of NOMe-, ATAC- and DNase I-seq data.
Karl J V Nordström, Florian Schmidt, Nina Gasparoni, Abdulrahman Salhab, Gilles Gasparoni, Thomas Lengauer

Nucleic Acids Res· November 2019

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Soluble immune markers in the different phases of chronic hepatitis B virus infection.
Steffen B Wiegand, Bastian Beggel, Anika Wranke, Elmira Aliabadi, Jerzy Jaroszewicz, Thomas Lengauer

Sci Rep· October 2019

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Failure of Dolutegravir First-Line ART with Selection of Virus Carrying R263K and G118R.
Nadine Lübke, Björn Jensen, Falk Hüttig, Torsten Feldt, Andreas Walker, Thomas Lengauer

N Engl J Med· August 2019

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Near-Neighbor Interactions in the NS3-4A Protease of HCV Impact Replicative Fitness of Drug-Resistant Viral Variants.
Nadezhda T Doncheva, Francisco S Domingues, David R McGivern, Tetsuro Shimakami, Stefan Zeuzem, Thomas Lengauer

J Mol Biol· May 2019

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Relative Principal Components Analysis: Application to Analyzing Biomolecular Conformational Changes.
Mazen Ahmad, Volkhard Helms, Olga V Kalinina, Thomas Lengauer

J Chem Theory Comput· April 2019

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RnBeads 2.0: comprehensive analysis of DNA methylation data.
Fabian Müller, Michael Scherer, Yassen Assenov, Pavlo Lutsik, Jörn Walter, Thomas Lengauer

Genome Biol· March 2019

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Integrative analysis of single-cell expression data reveals distinct regulatory states in bidirectional promoters.
Fatemeh Behjati Ardakani, Kathrin Kattler, Karl Nordström, Nina Gasparoni, Gilles Gasparoni, Thomas Lengauer

Epigenetics Chromatin· November 2018

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