Publications by authors named "Thomas Thorne"

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Impact of social deprivation upon the preoperative pathway and early surgical outcomes after pancreatoduodenectomy for PDAC and non-PDAC periampullary cancer in England: the Surg-Panc-UK study.
Thomas W Thorne, Siobhan C McKay, Samir Pathak, Richard Wilkin, Jenifer Barrie

HPB (Oxford)· October 2025

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The impact of FDG-PET/CT on the diagnostic pathway of surgically treated pancreatic ductal adenocarcinoma: the Surg-Panc-UK study.
Siobhan C McKay, Thomas W Thorne, Samir Pathak, Richard J W Wilkin, Jenifer Barrie

HPB (Oxford)· September 2025

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Calibration of stochastic, agent-based neuron growth models with approximate Bayesian computation.
Tobias Duswald, Lukas Breitwieser, Thomas Thorne, Barbara Wohlmuth, Roman Bauer

J Math Biol· October 2024

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Shrinkage estimation of gene interaction networks in single-cell RNA sequencing data.
Duong H T Vo, Thomas Thorne

BMC Bioinformatics· October 2024

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Identifying Subpopulations of Cells in Single-Cell Transcriptomic Data: A Bayesian Mixture Modeling Approach to Zero Inflation of Counts.
Tom Wilson, Duong H T Vo, Thomas Thorne

J Comput Biol· October 2023

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Inhibition of the angiotensin II type 2 receptor ATR is a novel therapeutic strategy for glioblastoma.
Richard Perryman, Alexander Renziehausen, Hamidreza Shaye, Androniki D Kostagianni, Antonis D Tsiailanis, Thomas Thorne

Proc Natl Acad Sci U S A· August 2022

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Can trainees safely perform pancreatoenteric anastomosis? A systematic review, meta-analysis, and risk-adjusted analysis of postoperative pancreatic fistula.

Surgery· July 2022

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Topological approximate Bayesian computation for parameter inference of an angiogenesis model.
Thomas Thorne, Paul D W Kirk, Heather A Harrington

Bioinformatics· April 2022

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External validation of postoperative pancreatic fistula prediction scores in pancreatoduodenectomy: a systematic review and meta-analysis.

HPB (Oxford)· March 2022

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Approximate inference of gene regulatory network models from RNA-Seq time series data.
Thomas Thorne

BMC Bioinformatics· April 2018

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NetDiff - Bayesian model selection for differential gene regulatory network inference.
Thomas Thorne

Sci Rep· December 2016

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Empirical likelihood tests for nonparametric detection of differential expression from RNA-seq data.
Thomas Thorne

Stat Appl Genet Mol Biol· December 2015

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Derivative processes for modelling metabolic fluxes.
Justina Zurauskienė, Paul Kirk, Thomas Thorne, John Pinney, Michael Stumpf

Bioinformatics· July 2014

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Model selection in systems and synthetic biology.
Paul Kirk, Thomas Thorne, Michael P H Stumpf

Curr Opin Biotechnol· August 2013

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Graphical modelling of molecular networks underlying sporadic inclusion body myositis.
Thomas Thorne, Pietro Fratta, Michael G Hanna, Andrea Cortese, Vincent Plagnol

Mol Biosyst· July 2013

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Inference of temporally varying Bayesian networks.
Thomas Thorne, Michael P H Stumpf

Bioinformatics· December 2012

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Combinatorial stresses kill pathogenic Candida species.
Despoina Kaloriti, Anna Tillmann, Emily Cook, Mette Jacobsen, Tao You, Thomas Thorne

Med Mycol· October 2012

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Graph spectral analysis of protein interaction network evolution.
Thomas Thorne, Michael P H Stumpf

J R Soc Interface· October 2012

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Parameter-free model discrimination criterion based on steady-state coplanarity.
Heather A Harrington, Kenneth L Ho, Thomas Thorne, Michael P H Stumpf

Proc Natl Acad Sci U S A· September 2012

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A systems biology analysis of long and short-term memories of osmotic stress adaptation in fungi.
Tao You, Piers Ingram, Mette D Jacobsen, Emily Cook, Andrew McDonagh, Thomas Thorne

BMC Res Notes· May 2012

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Calibrating spatio-temporal models of leukocyte dynamics against in vivo live-imaging data using approximate Bayesian computation.
Juliane Liepe, Harriet Taylor, Chris P Barnes, Maxime Huvet, Laurence Bugeon, Thomas Thorne

Integr Biol (Camb)· March 2012

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Prediction of putative protein interactions through evolutionary analysis of osmotic stress response in the model yeast Saccharomyces cerevisae.
Thomas W Thorne, Hsueh-Lui Ho, Maxime Huvet, Ken Haynes, Michael P H Stumpf

Fungal Genet Biol· May 2011

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Estimating the size of the human interactome.
Michael P H Stumpf, Thomas Thorne, Eric de Silva, Ronald Stewart, Hyeong Jun An

Proc Natl Acad Sci U S A· May 2008

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Generating confidence intervals on biological networks.
Thomas Thorne, Michael P H Stumpf

BMC Bioinformatics· November 2007

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Evolution at the system level: the natural history of protein interaction networks.
Michael P H Stumpf, William P Kelly, Thomas Thorne, Carsten Wiuf

Trends Ecol Evol· July 2007

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