Publications by authors named "Tiejun Dong"

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Pre-trained language models for protein and molecular design.
Erdong Zhang, Zilin Pan, Zequan Yao, Tiejun Dong, Guanxing Chen

Phys Chem Chem Phys· July 2025

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Multi-objective drug design with a scaffold-aware variational autoencoder.
Tiejun Dong, Linlin You, Calvin Yu-Chian Chen

Chem Sci· July 2025

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Interaction-Based Inductive Bias in Graph Neural Networks: Enhancing Protein-Ligand Binding Affinity Predictions From 3D Structures.
Ziduo Yang, Weihe Zhong, Qiujie Lv, Tiejun Dong, Guanxing Chen

IEEE Trans Pattern Anal Mach Intell· December 2024

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Nanoparticles for inducing Gaucher disease-like damage in cancer cells.
Chunyan Yue, Wenjing Lu, Shuxin Fan, Zhusheng Huang, Jiaying Yang, Hong Dong, Tiejun Dong

Nat Nanotechnol· August 2024

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Equivariant Flexible Modeling of the Protein-Ligand Binding Pose with Geometric Deep Learning.
Tiejun Dong, Ziduo Yang, Jun Zhou, Calvin Yu-Chian Chen

J Chem Theory Comput· November 2023

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Geometric Interaction Graph Neural Network for Predicting Protein-Ligand Binding Affinities from 3D Structures (GIGN).
Ziduo Yang, Weihe Zhong, Qiujie Lv, Tiejun Dong, Calvin Yu-Chian Chen

J Phys Chem Lett· March 2023

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Hijacking Self-Assembly to Establish Intracellular Functional Nanoparticles.
Yang Liu, Yuchen Wang, Chao Wang, Tiejun Dong, Haiheng Xu

Adv Sci (Weinh)· November 2022

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Membrane Vesicles as a Catalase Carrier for Long-Term Tumor Hypoxia Relief to Enhance Radiotherapy.
Wenjing Zai, Lin Kang, Tiejun Dong, Haoran Wang, Lining Yin

ACS Nano· September 2021

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Accurate Estimation of Solvent Accessible Surface Area for Coarse-Grained Biomolecular Structures with Deep Learning.
Tiejun Dong, Tong Gong, Wenfei Li

J Phys Chem B· August 2021

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Huanglian-Wendan Decoction Inhibits NF-B/NLRP3 Inflammasome Activation in Liver and Brain of Rats Exposed to Chronic Unpredictable Mild Stress.
Ke-Ke Jia, Hong Ding, Han-Wen Yu, Tie-Jun Dong, Ying Pan, Ling-Dong Kong

Mediators Inflamm· October 2018

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