Publications by authors named "Ziduo Yang"

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A Benchmark Framework for the Right Atrium Cavity Segmentation From LGE-MRIs.
Jieyun Bai, Jinwen Zhu, Zhiting Chen, Ziduo Yang, Yaosheng Lu

IEEE Trans Med Imaging· December 2025

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Multi-Scale, Multi-Basis Wavelet Voting Network for Automatic Analysis of Fetal Heart Rate Signals.
Yaosheng Lu, Jiewen Liu, Jieyun Bai, Jingbo Rong, Jianguo Qi, Ziduo Yang

IEEE J Biomed Health Inform· December 2025

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Multi-scale multi-object semi-supervised consistency learning for ultrasound image segmentation.
Saidi Guo, Zhaoshan Liu, Ziduo Yang, Chau Hung Lee, Qiujie Lv

Neural Netw· April 2025

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Meta-MolNet: A Cross-Domain Benchmark for Few Examples Drug Discovery.
Qiujie Lv, Guanxing Chen, Ziduo Yang, Weihe Zhong, Calvin Yu-Chian Chen

IEEE Trans Neural Netw Learn Syst· March 2025

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Interaction-Based Inductive Bias in Graph Neural Networks: Enhancing Protein-Ligand Binding Affinity Predictions From 3D Structures.
Ziduo Yang, Weihe Zhong, Qiujie Lv, Tiejun Dong, Guanxing Chen

IEEE Trans Pattern Anal Mach Intell· December 2024

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A multimodal model in the prediction of the delivery mode using data from a digital twin-empowered labor monitoring system.
Jieyun Bai, Xue Kang, Weishan Wang, Ziduo Yang, Weiguang Ou

Digit Health· December 2024

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Scalable crystal structure relaxation using an iteration-free deep generative model with uncertainty quantification.
Ziduo Yang, Yi-Ming Zhao, Xian Wang, Xiaoqing Liu, Xiuying Zhang

Nat Commun· September 2024

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Meta Learning With Graph Attention Networks for Low-Data Drug Discovery.
Qiujie Lv, Guanxing Chen, Ziduo Yang, Weihe Zhong, Calvin Yu-Chian Chen

IEEE Trans Neural Netw Learn Syst· August 2024

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Equivariant Flexible Modeling of the Protein-Ligand Binding Pose with Geometric Deep Learning.
Tiejun Dong, Ziduo Yang, Jun Zhou, Calvin Yu-Chian Chen

J Chem Theory Comput· November 2023

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TCMBank: bridges between the largest herbal medicines, chemical ingredients, target proteins, and associated diseases with intelligence text mining.
Qiujie Lv, Guanxing Chen, Haohuai He, Ziduo Yang, Lu Zhao

Chem Sci· October 2023

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Recent progress in transformer-based medical image analysis.
Zhaoshan Liu, Qiujie Lv, Ziduo Yang, Yifan Li, Chau Hung Lee

Comput Biol Med· September 2023

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3D graph neural network with few-shot learning for predicting drug-drug interactions in scaffold-based cold start scenario.
Qiujie Lv, Jun Zhou, Ziduo Yang, Haohuai He, Calvin Yu-Chian Chen

Neural Netw· August 2023

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Retrosynthesis prediction using an end-to-end graph generative architecture for molecular graph editing.
Weihe Zhong, Ziduo Yang, Calvin Yu-Chian Chen

Nat Commun· May 2023

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Geometric Interaction Graph Neural Network for Predicting Protein-Ligand Binding Affinities from 3D Structures (GIGN).
Ziduo Yang, Weihe Zhong, Qiujie Lv, Tiejun Dong, Calvin Yu-Chian Chen

J Phys Chem Lett· March 2023

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TCMBank-the largest TCM database provides deep learning-based Chinese-Western medicine exclusion prediction.
Qiujie Lv, Guanxing Chen, Haohuai He, Ziduo Yang, Lu Zhao

Signal Transduct Target Ther· March 2023

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Learning size-adaptive molecular substructures for explainable drug-drug interaction prediction by substructure-aware graph neural network.
Ziduo Yang, Weihe Zhong, Qiujie Lv, Calvin Yu-Chian Chen

Chem Sci· July 2022

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Multitask deep learning with dynamic task balancing for quantum mechanical properties prediction.
Ziduo Yang, Weihe Zhong, Qiujie Lv, Calvin Yu-Chian Chen

Phys Chem Chem Phys· March 2022

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MGraphDTA: deep multiscale graph neural network for explainable drug-target binding affinity prediction.
Ziduo Yang, Weihe Zhong, Lu Zhao, Calvin Yu-Chian Chen

Chem Sci· January 2022

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CARes-UNet: Content-aware residual UNet for lesion segmentation of COVID-19 from chest CT images.
Xinhua Xu, Yuhang Wen, Lu Zhao, Yi Zhang, Youjun Zhao, Ziduo Yang

Med Phys· November 2021

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Graph convolutional network approach to investigate potential selective Limk1 inhibitors.
Weihe Zhong, Lu Zhao, Ziduo Yang, Calvin Yu-Chian Chen

J Mol Graph Model· September 2021

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Lung Lesion Localization of COVID-19 From Chest CT Image: A Novel Weakly Supervised Learning Method.
Ziduo Yang, Lu Zhao, Shuyu Wu, Calvin Yu-Chian Chen

IEEE J Biomed Health Inform· June 2021

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ML-DTI: Mutual Learning Mechanism for Interpretable Drug-Target Interaction Prediction.
Ziduo Yang, Weihe Zhong, Lu Zhao, Calvin Yu-Chian Chen

J Phys Chem Lett· May 2021

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Automatic segmentation of hippocampus in hippocampal sparing whole brain radiotherapy: A multitask edge-aware learning.
Qingtao Qiu, Ziduo Yang, Shuyu Wu, Dongdong Qian, Jun Wei

Med Phys· April 2021

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