Publications by authors named "Tomislav Smuc"

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Advanced Digital Skills for Health Professionals: 20 Joint Learning Objectives.
Minna Isomursu, Ornela Bardhi, Alexander Berler, Ioanna Chouvarda, Jens Declerck, Tomislav Smuc

Stud Health Technol Inform· May 2025

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Dynamic applicability domain (dAD): compound-target binding affinity estimates with local conformal prediction.
Davor Oršolić, Tomislav Šmuc

Bioinformatics· August 2023

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Chemical Evaluation, Antioxidant, Antiproliferative, Anti-Inflammatory and Antibacterial Activities of Organic Extract and Semi-Purified Fractions of the Adriatic Sea Fan, .
Dario Matulja, Petra Grbčić, Krunoslav Bojanić, Natalija Topić-Popović, Rozelindra Čož-Rakovac

Molecules· September 2021

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Search for Novel Lead Inhibitors of Yeast Cytochrome bc1, from Drugbank and COCONUT.
Ozren Jović, Tomislav Šmuc

Molecules· July 2021

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Comprehensive machine learning based study of the chemical space of herbicides.
Davor Oršolić, Vesna Pehar, Tomislav Šmuc, Višnja Stepanić

Sci Rep· June 2021

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In Vitro Confirmation of Siramesine as a Novel Antifungal Agent with In Silico Lead Proposals of Structurally Related Antifungals.
Josipa Vlainić, Ozren Jović, Ivan Kosalec, Oliver Vugrek, Rozelindra Čož-Rakovac

Molecules· June 2021

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From Knowledge Transmission to Knowledge Construction: A Step towards Human-Like Active Learning.
Ilona Kulikovskikh, Tomislav Lipic, Tomislav Šmuc

Entropy (Basel)· August 2020

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Combined Machine Learning and Molecular Modelling Workflow for the Recognition of Potentially Novel Fungicides.
Ozren Jović, Tomislav Šmuc

Molecules· May 2020

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BioGD: Bio-inspired robust gradient descent.
Ilona Kulikovskikh, Sergej Prokhorov, Tomislav Lipić, Tarzan Legović, Tomislav Šmuc

PLoS One· February 2020

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Patterns of diverse gene functions in genomic neighborhoods predict gene function and phenotype.
Matej Mihelčić, Tomislav Šmuc, Fran Supek

Sci Rep· December 2019

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The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens.
Naihui Zhou, Yuxiang Jiang, Timothy R Bergquist, Alexandra J Lee, Balint Z Kacsoh

Genome Biol· November 2019

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The evolutionary signal in metagenome phyletic profiles predicts many gene functions.
Vedrana Vidulin, Tomislav Šmuc, Sašo Džeroski, Fran Supek

Microbiome· July 2018

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Using redescription mining to relate clinical and biological characteristics of cognitively impaired and Alzheimer's disease patients.
Matej Mihelčić, Goran Šimić, Mirjana Babić Leko, Nada Lavrač, Sašo Džeroski

PLoS One· November 2017

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Extensive complementarity between gene function prediction methods.
Vedrana Vidulin, Tomislav Šmuc, Fran Supek

Bioinformatics· December 2016

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The landscape of microbial phenotypic traits and associated genes.
Maria Brbić, Matija Piškorec, Vedrana Vidulin, Anita Kriško, Tomislav Šmuc

Nucleic Acids Res· December 2016

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Identification of Patient Zero in Static and Temporal Networks: Robustness and Limitations.
Nino Antulov-Fantulin, Alen Lančić, Tomislav Šmuc, Hrvoje Štefančić, Mile Šikić

Phys Rev Lett· June 2015

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Cohesiveness in financial news and its relation to market volatility.
Matija Piškorec, Nino Antulov-Fantulin, Petra Kralj Novak, Igor Mozetič, Miha Grčar, Tomislav Smuc

Sci Rep· May 2014

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Accurate models for P-gp drug recognition induced from a cancer cell line cytotoxicity screen.
Jurica Levatić, Jasna Ćurak, Marijeta Kralj, Tomislav Šmuc, Maja Osmak

J Med Chem· July 2013

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Phyletic profiling with cliques of orthologs is enhanced by signatures of paralogy relationships.
Nives Skunca, Matko Bošnjak, Anita Kriško, Panče Panov, Sašo Džeroski, Tomislav Smuc

PLoS Comput Biol· June 2013

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A large-scale evaluation of computational protein function prediction.
Predrag Radivojac, Wyatt T Clark, Tal Ronnen Oron, Alexandra M Schnoes, Tobias Wittkop

Nat Methods· March 2013

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Putative mechanisms of antitumor activity of cyano-substituted heteroaryles in HeLa cells.
Katja Ester, Fran Supek, Kristina Majsec, Marko Marjanović, David Lembo

Invest New Drugs· April 2012

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REVIGO summarizes and visualizes long lists of gene ontology terms.
Fran Supek, Matko Bošnjak, Nives Škunca, Tomislav Šmuc

PLoS One· November 2011

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Could LogP be a principal determinant of biological activity in 18-crown-6 ethers? Synthesis of biologically active adamantane-substituted diaza-crowns.
Fran Supek, Tatjana Šumanovac Ramljak, Marko Marjanović, Maja Buljubašić, Goran Kragol, Tomislav Smuc

Eur J Med Chem· August 2011

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Proteome sequence features carry signatures of the environmental niche of prokaryotes.
Zlatko Smole, Nela Nikolic, Fran Supek, Tomislav Šmuc, Ivo F Sbalzarini

BMC Evol Biol· January 2011

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Translational selection is ubiquitous in prokaryotes.
Fran Supek, Nives Skunca, Jelena Repar, Kristian Vlahovicek, Tomislav Smuc

PLoS Genet· June 2010

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