Publications by authors named "Wenhui Xi"

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Decoding circRNA translation: challenges and advances in computational method development.
Jingjing Zhang, Rui Zhou, Huiling Zhang, Yin Peng, Jintao Meng, Wenhui Xi

Front Genet· July 2025

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A dataset for machine learning-based QSAR models establishment to screen beta-lactamase inhibitors using the FARM -BIOMOL chemical library.
Thanet Pitakbut, Jennifer Munkert, Wenhui Xi, Yanjie Wei, Gregor Fuhrmann

BMC Res Notes· March 2025

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CircRNA Profiles Analysis of Neuroblastoma for Identification of Drug Targets.
Jingjing Zhang, Zhen Ju, Huiling Zhang, Haiping Zhang, Rui Zhou, Wenhui Xi

IEEE Trans Comput Biol Bioinform· January 2025

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Utilizing machine learning-based QSAR model to overcome standalone consensus docking limitation in beta-lactamase inhibitors screening: a proof-of-concept study.
Thanet Pitakbut, Jennifer Munkert, Wenhui Xi, Yanjie Wei, Gregor Fuhrmann

BMC Chem· December 2024

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RevGraphVAMP: A protein molecular simulation analysis model combining graph convolutional neural networks and physical constraints.
Ying Huang, Huiling Zhang, Zhenli Lin, Yanjie Wei, Wenhui Xi

Methods· September 2024

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A Weakly Supervised Learning Method for Cell Detection and Tracking Using Incomplete Initial Annotations.
Hao Wu, Jovial Niyogisubizo, Keliang Zhao, Jintao Meng, Wenhui Xi

Int J Mol Sci· November 2023

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Substrate-Controlled Catalysis in the Ether Cross-Link-Forming Radical SAM Enzymes.
Suze Ma, Wenhui Xi, Shu Wang, Heng Chen, Sijia Guo, Zixin Deng

J Am Chem Soc· October 2023

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JCcirc: circRNA full-length sequence assembly through integrated junction contigs.
Jingjing Zhang, Huiling Zhang, Zhen Ju, Yin Peng, Yi Pan, Wenhui Xi

Brief Bioinform· September 2023

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The relationship between lifestyle, driving anger and dangerous driving behaviours-An explorative study in a Chinese sample.
Chenzhao Zhai, Wenhui Xi

Heliyon· June 2023

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Identification of Autism spectrum disorder based on a novel feature selection method and Variational Autoencoder.
Fangyu Zhang, Yanjie Wei, Jin Liu, Yanlin Wang, Wenhui Xi

Comput Biol Med· September 2022

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Inter-Residue Distance Prediction From Duet Deep Learning Models.
Huiling Zhang, Ying Huang, Zhendong Bei, Zhen Ju, Jintao Meng, Wenhui Xi

Front Genet· May 2022

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Bioinformatics Screening of Potential Biomarkers from mRNA Expression Profiles to Discover Drug Targets and Agents for Cervical Cancer.
Md Selim Reza, Md Harun-Or-Roshid, Md Ariful Islam, Md Alim Hossen, Md Tofazzal Hossain, Wenhui Xi

Int J Mol Sci· April 2022

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Evaluation of residue-residue contact prediction methods: From retrospective to prospective.
Huiling Zhang, Zhendong Bei, Wenhui Xi, Min Hao, Zhen Ju

PLoS Comput Biol· May 2021

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On the Conformational Dynamics of β-Amyloid Forming Peptides: A Computational Perspective.
Konda Mani Saravanan, Haiping Zhang, Huiling Zhang, Wenhui Xi, Yanjie Wei

Front Bioeng Biotechnol· June 2020

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Stability of Aβ-fibril fragments in the presence of fatty acids.
Wenhui Xi, Elliott K Vanderford, Qinxin Liao, Ulrich H E Hansmann

Protein Sci· November 2019

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The effect of retro-inverse D-amino acid Aβ-peptides on Aβ-fibril formation.
Wenhui Xi, Ulrich H E Hansmann

J Chem Phys· March 2019

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Large fatty acid-derived Aβ42 oligomers form ring-like assemblies.
Wenhui Xi, Dexter N Dean, Kelli A Stockmal, Sarah E Morgan, Ulrich H E Hansmann

J Chem Phys· February 2019

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Stability of the N-Terminal Helix and Its Role in Amyloid Formation of Serum Amyloid A.
Wenhua Wang, Wenhui Xi, Ulrich H E Hansmann

ACS Omega· November 2018

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Out-of-Register Aβ Assemblies as Models for Neurotoxic Oligomers and Fibrils.
Wenhui Xi, Elliott K Vanderford, Ulrich H E Hansmann

J Chem Theory Comput· February 2018

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Conversion between parallel and antiparallel β-sheets in wild-type and Iowa mutant Aβ fibrils.
Wenhui Xi, Ulrich H E Hansmann

J Chem Phys· January 2018

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Fibril-Barrel Transitions in Cylindrin Amyloids.
Huiling Zhang, Wenhui Xi, Ulrich H E Hansmann, Yanjie Wei

J Chem Theory Comput· August 2017

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Ring-like N-fold Models of Aβ fibrils.
Wenhui Xi, Ulrich H E Hansmann

Sci Rep· July 2017

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Correction to Simulating Protein Fold Switching by Replica Exchange with Tunneling.
Nathan A Bernhardt, Wenhui Xi, Wei Wang, Ulrich H E Hansmann

J Chem Theory Comput· January 2017

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Simulating Protein Fold Switching by Replica Exchange with Tunneling.
Nathan A Bernhardt, Wenhui Xi, Wei Wang, Ulrich H E Hansmann

J Chem Theory Comput· November 2016

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Stability of a Recently Found Triple-β-Stranded Aβ1-42 Fibril Motif.
Wenhui Xi, Wenhua Wang, Gabrielle Abbott, Ulrich H E Hansmann

J Phys Chem B· May 2016

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