Publications by authors named "William Ritchie"

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SeqManager: a web-based tool for efficient sequencing data storage management and duplicate detection.
Margot Celerier, Andrew J Oldfield, William Ritchie

Bioinform Adv· December 2025

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Generating realistic artificial human genomes using adversarial autoencoders.
Callum Burnard, Alban Mancheron, William Ritchie

NAR Genom Bioinform· September 2025

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IRFinder-S: a comprehensive suite to discover and explore intron retention.
Claudio Lorenzi, Sylvain Barriere, Katharina Arnold, Reini F Luco, Andrew J Oldfield, William Ritchie

Genome Biol· November 2021

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A cell-to-patient machine learning transfer approach uncovers novel basal-like breast cancer prognostic markers amongst alternative splice variants.
Jean-Philippe Villemin, Claudio Lorenzi, Marie-Sarah Cabrillac, Andrew Oldfield, William Ritchie

BMC Biol· April 2021

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Identification of CRYAB KCNN3 SOX9 Astrocyte-Like and EGFR PDGFRA OLIG1 Oligodendrocyte-Like Tumoral Cells in Diffuse IDH1-Mutant Gliomas and Implication of NOTCH1 Signalling in Their Genesis.
Meera Augustus, Donovan Pineau, Franck Aimond, Safa Azar, Davide Lecca, William Ritchie

Cancers (Basel)· April 2021

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Intron retention and its impact on gene expression and protein diversity: A review and a practical guide.
David F Grabski, Lucile Broseus, Bandana Kumari, David Rekosh, Marie-Louise Hammarskjold, William Ritchie

Wiley Interdiscip Rev RNA· January 2021

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TALC: Transcript-level Aware Long-read Correction.
Lucile Broseus, Aubin Thomas, Andrew J Oldfield, Dany Severac, Emeric Dubois, William Ritchie

Bioinformatics· December 2020

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iMOKA: k-mer based software to analyze large collections of sequencing data.
Claudio Lorenzi, Sylvain Barriere, Jean-Philippe Villemin, Laureline Dejardin Bretones, Alban Mancheron, William Ritchie

Genome Biol· October 2020

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NF90 modulates processing of a subset of human pri-miRNAs.
Giuseppa Grasso, Takuma Higuchi, Victor Mac, Jérôme Barbier, Marion Helsmoortel, William Ritchie

Nucleic Acids Res· July 2020

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GECKO is a genetic algorithm to classify and explore high throughput sequencing data.
Aubin Thomas, Sylvain Barriere, Lucile Broseus, Julie Brooke, Claudio Lorenzi, William Ritchie

Commun Biol· April 2020

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Challenges in detecting and quantifying intron retention from next generation sequencing data.
Lucile Broseus, William Ritchie

Comput Struct Biotechnol J· February 2020

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Exploring the Roles of and in the Regulation of Angiogenesis by High-Density Lipoproteins.
Nathan K P Wong, Helena Cheung, Emma L Solly, Laura Z Vanags, William Ritchie

Int J Mol Sci· June 2018

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An NF90/NF110-mediated feedback amplification loop regulates dicer expression and controls ovarian carcinoma progression.
Jérôme Barbier, Xin Chen, Gabriel Sanchez, Muyan Cai, Marion Helsmoortel, William Ritchie

Cell Res· May 2018

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Identifying microRNA determinants of human myelopoiesis.
Megha Rajasekhar, Ulf Schmitz, Stephane Flamant, Justin J-L Wong, Charles G Bailey, William Ritchie

Sci Rep· May 2018

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microRNA Target Prediction.
William Ritchie

Methods Mol Biol· January 2018

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Intron retention enhances gene regulatory complexity in vertebrates.
Ulf Schmitz, Natalia Pinello, Fangzhi Jia, Sultan Alasmari, William Ritchie

Genome Biol· November 2017

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A Liver Capsular Network of Monocyte-Derived Macrophages Restricts Hepatic Dissemination of Intraperitoneal Bacteria by Neutrophil Recruitment.
Frederic Sierro, Maximilien Evrard, Simone Rizzetto, Michelle Melino, Andrew J Mitchell, William Ritchie

Immunity· August 2017

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Intron retention is regulated by altered MeCP2-mediated splicing factor recruitment.
Justin J-L Wong, Dadi Gao, Trung V Nguyen, Chau-To Kwok, Michelle van Geldermalsen, William Ritchie

Nat Commun· May 2017

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IRFinder: assessing the impact of intron retention on mammalian gene expression.
Robert Middleton, Dadi Gao, Aubin Thomas, Babita Singh, Amy Au, William Ritchie

Genome Biol· March 2017

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Beliefs about the causes and cures of depression.
Adrian Furnham, William Ritchie, Alixe Lay

Int J Soc Psychiatry· August 2016

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Cloning of the African indigenous cattle breed Kenyan Boran.
Mingyan Yu, Charity Muteti, Moses Ogugo, William A Ritchie, Jayne Raper

Anim Genet· August 2016

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HIF-1α and rapamycin act as gerosuppressant in multiple myeloma cells upon genotoxic stress.
Clémence Coudre, Julien Alani, William Ritchie, Véronique Marsaud, Brigitte Sola

Cell Cycle· August 2016

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The Poly-cistronic miR-23-27-24 Complexes Target Endothelial Cell Junctions: Differential Functional and Molecular Effects of miR-23a and miR-23b.
Jia Li, Yang Zhao, Ying Lu, William Ritchie, Georges Grau

Mol Ther Nucleic Acids· August 2016

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RBM3 regulates temperature sensitive miR-142-5p and miR-143 (thermomiRs), which target immune genes and control fever.
Justin J-L Wong, Amy Y M Au, Dadi Gao, Natalia Pinello, Chau-To Kwok, William Ritchie

Nucleic Acids Res· April 2016

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A dynamic intron retention program in the mammalian megakaryocyte and erythrocyte lineages.
Christopher R Edwards, William Ritchie, Justin J-L Wong, Ulf Schmitz, Robert Middleton

Blood· April 2016

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