Publications by authors named "Yanrui Ding"

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Research advancements in deep eutectic solvent pretreatment technologies and bioconversion of straw biomass.
Tong Zhang, Yanrui Ding, Xiaotong Fan, Fangzheng Yang, Zhen Wang

Bioresour Technol· December 2025

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A Scalable and Robust Ensemble Deep Learning Method for Predicting Drug-Target Interactions.
Zhixing Cheng, Qunfang Yan, Dewu Ding, Yanrui Ding

Interdiscip Sci· October 2025

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[Research on prediction model of protein thermostability integrating graph embedding and network topology features].
Shuyi Pan, Xiaoyang Xiang, Qunfang Yan, Yanrui Ding

Sheng Wu Yi Xue Gong Cheng Xue Za Zhi· August 2025

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[Optimization of Carbon Balance Zoning and Pattern in Beijing-Tianjin-Hebei Counties].
Jiao Pang, Xue-Han Huang, Jing Shan, Zi-Han Miao, Feng Yan, Yan-Rui Ding

Huan Jing Ke Xue· April 2025

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Prediction of Drug-Target Interactions With High- Quality Negative Samples and a Network-Based Deep Learning Framework.
Zhixing Cheng, Deling Xu, Dewu Ding, Yanrui Ding

IEEE J Biomed Health Inform· March 2025

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Identifying Diagnostic Biomarkers for Autism Spectrum Disorder From Higher-order Interactions Using the PED Algorithm.
Hao Wang, Yanting Liu, Yanrui Ding

Neuroinformatics· July 2024

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CDCS-TCM: A framework based on complex network theory to analyze the causality and dynamic correlation of substances in the metabolic process of traditional Chinese medicine.
Jiaxuan Gao, Xiaoyang Xiang, Qunfang Yan, Yanrui Ding

J Ethnopharmacol· June 2024

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The Dynamical Biomarkers in Functional Connectivity of Autism Spectrum Disorder Based on Dynamic Graph Embedding.
Yanting Liu, Hao Wang, Yanrui Ding

Interdiscip Sci· March 2024

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DeepPPThermo: A Deep Learning Framework for Predicting Protein Thermostability Combining Protein-Level and Amino Acid-Level Features.
Xiaoyang Xiang, Jiaxuan Gao, Yanrui Ding

J Comput Biol· February 2024

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GCNA-Cluster: A Gene Co-Expression Network Alignment to Cluster Cancer Patients Algorithm for Identifying Subtypes of Pancreatic Ductal Adenocarcinoma.
Jing Yang, Zhengshu Lu, Xu Chen, Deling Xu, Dewu Ding, Yanrui Ding

IEEE/ACM Trans Comput Biol Bioinform· December 2023

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[Investigation of the mechanism of action and identification of candidate traditional Chinese medicines for the treatment of ischemic stroke in the Danshen-Jiangxiang pair based on drug-target-disease association network].
Jiaxuan Gao, Yanrui Ding

Sheng Wu Yi Xue Gong Cheng Xue Za Zhi· August 2023

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RSC-based differential model with correlation removal for improving multi-omics clustering.
Zhengshu Lu, Xu Chen, Jing Yang, Yanrui Ding

J Theor Biol· January 2023

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A 70‑RNA model based on SVR and RFE for predicting the pancreatic cancer clinical prognosis.
Xu Chen, Jing Yang, Zhengshu Lu, Yanrui Ding

Methods· August 2022

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Probing the Relation Between Community Evolution in Dynamic Residue Interaction Networks and Xylanase Thermostability.
Chen Zhang, Yanrui Ding

IEEE/ACM Trans Comput Biol Bioinform· January 2022

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The Quantitative Structure-Activity Relationships between GABAA Receptor and Ligands based on Binding Interface Characteristic.
Shu Cheng, Yanrui Ding

Curr Comput Aided Drug Des· January 2022

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Identification of Key Features of CNS Drugs Based on SVM and Greedy Algorithm.
Ruilin Zhang, Yanrui Ding

Curr Comput Aided Drug Des· October 2021

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Determination of the key ccRCC-related molecules from monolayer network to three-layer network.
Yanyan Wu, Yanrui Ding, Jie Wang, Xiaxia Wang

Cancer Genet· August 2021

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Identification of subtype specific biomarkers of clear cell renal cell carcinoma using random forest and greedy algorithm.
Yanyan Wu, Weishan Han, Deling Xu, Xiaxia Wang, Jing Yang, Yanrui Ding

Biosystems· June 2021

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Identification of the complex regulatory relationships related to gastric cancer from lncRNA-miRNA-mRNA network.
Jie Wang, Yanrui Ding, Yanyan Wu, Xiaxia Wang

J Cell Biochem· January 2020

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Identification of the Key Factors Related to Bladder Cancer by lncRNA-miRNA-mRNA Three-Layer Network.
Xiaxia Wang, Yanrui Ding, Jie Wang, Yanyan Wu

Front Genet· January 2020

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Polygala tenuifolia-Acori tatarinowii herbal pair as an inspiration for substituted cinnamic α-asaronol esters: Design, synthesis, anticonvulsant activity, and inhibition of lactate dehydrogenase study.
Yajun Bai, Xirui He, Yujun Bai, Ying Sun, Zefeng Zhao, Yanrui Ding

Eur J Med Chem· December 2019

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Thermostability of Lipase A and Dynamic Communication Based on Residue Interaction Network.
Qian Xia, Yanrui Ding

Protein Pept Lett· October 2019

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The Relation Between Lipase Thermostability and Dynamics of Hydrogen Bond and Hydrogen Bond Network Based on Long Time Molecular Dynamics Simulation.
Leiyu Zhang, Yanrui Ding

Protein Pept Lett· October 2017

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Communities in the iron superoxide dismutase amino acid network.
Yanrui Ding, Xueqin Wang, Zhaolin Mou

J Theor Biol· February 2015

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Comparison of protein-water interactions in psychrophilic, mesophilic, and thermophilic Fe-SOD.
Zhaolin Mou, Yanrui Ding, Xueqin Wang, Yujie Cai

Protein Pept Lett· June 2014

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