Publications by authors named "Yousif Shamoo"

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LiaS-dependent activation of the MadR regulon enables cross-talk between cell envelope defense systems.
Kara S Hood, Samie A Rizvi, Guillermo A Hoppe-Elsholz, Ana P Streling, Diana Panesso, Yousif Shamoo

bioRxiv· June 2025

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Comprehensive Assessment of Initial Adaptation of Extended-Spectrum β-Lactamase-Positive ST131 Escherichia coli to Carbapenem Exposure.
William C Shropshire, Xinhao Song, Jordan Bremer, Seokju Seo, Susana Rodriguez, Yousif Shamoo

J Infect Dis· April 2025

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Membrane Lipids Augment Cell Envelope Stress Signaling via the MadRS System to Defend Against Antimicrobial Peptides and Antibiotics in Enterococcus faecalis.
William R Miller, April Nguyen, Kavindra V Singh, Samie Rizvi, Ayesha Khan, Yousif Shamoo

J Infect Dis· February 2025

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Molecular basis of cell membrane adaptation in daptomycin-resistant Enterococcus faecalis.
April H Nguyen, Truc T Tran, Diana Panesso, Kara S Hood, Vinathi Polamraju, Yousif Shamoo

JCI Insight· November 2024

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Comprehensive Assessment of Initial Adaptation of ESBL Positive ST131 to Carbapenem Exposure.
William C Shropshire, Xinhao Song, Jordan Bremer, Seokju Seo, Susana Rodriguez, Yousif Shamoo

bioRxiv· July 2024

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LiaX is a surrogate marker for cell envelope stress and daptomycin non-susceptibility in .
Dierdre B Axell-House, Shelby R Simar, Diana Panesso, Sandra Rincon, William R Miller, Yousif Shamoo

Antimicrob Agents Chemother· March 2024

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The Biochemical Impact of Extracting an Embedded Adenylate Kinase Domain Using Circular Permutation.
Tom Coleman, John Shin, Jonathan J Silberg, Yousif Shamoo, Joshua T Atkinson

Biochemistry· March 2024

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Experimental evolution of to colistin in spatially confined microdroplets identifies evolutionary trajectories consistent with adaptation in microaerobic lung environments.
Saoirse Disney-McKeethen, Seokju Seo, Heer Mehta, Karukriti Ghosh, Yousif Shamoo

mBio· December 2023

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Membrane Lipids Augment Cell Envelope Stress Signaling and Resistance to Antibiotics and Antimicrobial Peptides in .
William R Miller, April Nguyen, Kavindra V Singh, Samie Rizvi, Ayesha Khan, Yousif Shamoo

bioRxiv· October 2023

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Methyl halide transferase-based gas reporters for quantification of filamentous bacteria in microdroplet emulsions.
Xinhao Song, Sarah J Kong, Seokju Seo, Ramya Ganiga Prabhakar, Yousif Shamoo

Appl Environ Microbiol· September 2023

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Molecular Basis of Cell Membrane Adaptation in Daptomycin-Resistant .
April H Nguyen, Truc T Tran, Diana Panesso, Kara Hood, Vinathi Polamraju, Yousif Shamoo

bioRxiv· August 2023

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LiaX is a surrogate marker for cell-envelope stress and daptomycin non-susceptibility in .
Dierdre B Axell-House, Shelby R Simar, Diana Panesso, Sandra Rincon, William R Miller, Yousif Shamoo

bioRxiv· August 2023

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Indirect Enrichment of Desirable, but Less Fit Phenotypes, from a Synthetic Microbial Community Using Microdroplet Confinement.
Ramya Ganiga Prabhakar, Gaoyang Fan, Razan N Alnahhas, Andrew J Hirning, Matthew R Bennett, Yousif Shamoo

ACS Synth Biol· April 2023

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Enolpyruvate transferase MurAA, identified during adaptation of Enterococcus faecium to daptomycin, increases stability of MurAA-MurG interaction.
Yue Zhou, Budi Utama, Shivendra Pratap, Adeline Supandy, Xinhao Song, Yousif Shamoo

J Biol Chem· March 2023

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Intracellular Experimental Evolution of Subsp. Live Vaccine Strain (LVS) to Antimicrobial Resistance.
Heer H Mehta, Xinhao Song, Yousif Shamoo

ACS Infect Dis· February 2023

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Indirect enrichment of desirable, but less fit phenotypes, from a synthetic microbial community using microdroplet confinement.
Ramya Ganiga Prabhakar, Gaoyang Fan, Razan N Alnahhas, Andrew J Hirning, Matthew R Bennett, Yousif Shamoo

bioRxiv· January 2023

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Microfluidic platform for spatially segregated experimental evolution studies with .
Seokju Seo, Ramya Ganiga Prabhakar, Saoirse Disney-McKeethen, Xinhao Song, Yousif Shamoo

STAR Protoc· June 2022

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Evolution of Enterococcus faecium in Response to a Combination of Daptomycin and Fosfomycin Reveals Distinct and Diverse Adaptive Strategies.
Adeline Supandy, Heer H Mehta, Truc T Tran, William R Miller, Rutan Zhang, Yousif Shamoo

Antimicrob Agents Chemother· June 2022

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Mutational Switch-Backs Can Accelerate Evolution of to a Combination of Ciprofloxacin and Doxycycline.
Heer H Mehta, David Ibarra, Christopher J Marx, Craig R Miller, Yousif Shamoo

Front Microbiol· May 2022

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Identification of Evolutionary Trajectories Associated with Antimicrobial Resistance Using Microfluidics.
Seokju Seo, Saoirse Disney-McKeethen, Ramya Ganiga Prabhakar, Xinhao Song, Heer H Mehta, Yousif Shamoo

ACS Infect Dis· January 2022

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EfgA is a conserved formaldehyde sensor that leads to bacterial growth arrest in response to elevated formaldehyde.
Jannell V Bazurto, Dipti D Nayak, Tomislav Ticak, Milya Davlieva, Jessica A Lee, Yousif Shamoo

PLoS Biol· May 2021

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Daptomycin Resistance in Enterococcus faecium Can Be Delayed by Disruption of the LiaFSR Stress Response Pathway.
Amy G Prater, Heer H Mehta, Kathryn Beabout, Adeline Supandy, William R Miller, Yousif Shamoo

Antimicrob Agents Chemother· March 2021

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Pathogenic Nocardia: A diverse genus of emerging pathogens or just poorly recognized?
Heer H Mehta, Yousif Shamoo

PLoS Pathog· March 2020

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Antimicrobial sensing coupled with cell membrane remodeling mediates antibiotic resistance and virulence in .
Ayesha Khan, Milya Davlieva, Diana Panesso, Sandra Rincon, William R Miller, Yousif Shamoo

Proc Natl Acad Sci U S A· December 2019

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Environment Shapes the Accessible Daptomycin Resistance Mechanisms in Enterococcus faecium.
Amy G Prater, Heer H Mehta, Abigael J Kosgei, William R Miller, Truc T Tran, Yousif Shamoo

Antimicrob Agents Chemother· October 2019

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