Publications by authors named "Adam Witney"

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Repurposing of the bisbenzimide antibiotic Ridinilazole as an antiviral compound against human cytomegalovirus.
Hayden Pinto, Katie A Latham, Steve Goodbourn, Adam A Witney, Blair L Strang

J Gen Virol· December 2025

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Correction: A pragmatic pipeline for drug resistance and lineage identification in Mycobacterium tuberculosis using whole genome sequencing.
Linzy Elton, Alp Aydin, Neil Stoker, Sylvia Rofael, Letícia Muraro Wildner, Adam Witney

PLOS Glob Public Health· September 2025

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Xpert MTB/RIF® cycle threshold as a marker of TB disease severity; Implications for TB treatment stratification.
Daniel J Grint, Jasvir Dhillon, Philip D Butcher, Jack Adams, Tulika Munshi, Adam A Witney

Clin Infect Dis· September 2025

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Author Correction: Rurality and relative poverty drive acquisition of a stable and diverse gut microbiome in early childhood in a non-industrialized setting.
Victor Seco-Hidalgo, Adam A Witney, Martha E Chico, Maritza Vaca, Andrea Arevalo

Sci Rep· April 2025

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A pragmatic pipeline for drug resistance and lineage identification in Mycobacterium tuberculosis using whole genome sequencing.
Linzy Elton, Alp Aydin, Neil Stoker, Sylvia Rofael, Letícia Muraro Wildner, Adam Witney

PLOS Glob Public Health· February 2025

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Rurality and relative poverty drive acquisition of a stable and diverse gut microbiome in early childhood in a non-industrialized setting.
Victor Seco-Hidalgo, Adam A Witney, Martha E Chico, Maritza Vaca, Andrea Arevalo

Sci Rep· February 2025

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Rurality and relative poverty drive acquisition of a stable and diverse gut microbiome in early childhood in a non-industrialized setting.
Victor Seco-Hidalgo, Adam Witney, Martha E Chico, Maritza Vaca, Andrea Arevalo

Res Sq· December 2024

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The presence of cystic fibrosis-related diabetes modifies the sputum microbiome in cystic fibrosis disease.
Stanislavs Vasiljevs, Adam A Witney, Deborah L Baines

Am J Physiol Lung Cell Mol Physiol· February 2024

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Time Required for Nanopore Whole-Genome Sequencing of Neisseria gonorrhoeae for Identification of Phylogenetic Relationships.
Laura T Phillips, Adam A Witney, Martina Furegato, Ken G Laing, Liqing Zhou

J Infect Dis· November 2023

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Baseline and acquired resistance to bedaquiline, linezolid and pretomanid, and impact on treatment outcomes in four tuberculosis clinical trials containing pretomanid.
Juliano Timm, Anna Bateson, Priya Solanki, Ana Paleckyte, Adam A Witney

PLOS Glob Public Health· October 2023

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Markers of epidemiological success of methicillin-resistant Staphylococcus aureus isolates in European populations.
Valérie O Baede, Arya Gupta, Gwenan M Knight, Leo M Schouls, Ken Laing, Adam A Witney

Clin Microbiol Infect· September 2023

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Four-Month High-Dose Rifampicin Regimens for Pulmonary Tuberculosis.
Amina Jindani, Daniel Atwine, Daniel Grint, Boubacar Bah, Jack Adams, Adam Witney

NEJM Evid· September 2023

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Mapping the phylogeny and lineage history of geographically distinct BCG vaccine strains.
Linzy Elton, Sandeep Kasaragod, Helen Donoghue, Hussain A Safar, Priscilla Amankwah, Adam A Witney

Microb Genom· August 2023

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A comparison of phenotypic and WGS drug susceptibility testing in isolates from the Republic of Korea.
Seung Heon Lee, Elena Ferran, Adam A Witney, Sungweon Ryu, Hyungseok Kang

JAC Antimicrob Resist· June 2023

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Strain-Dependent Restriction of Human Cytomegalovirus by Zinc Finger Antiviral Proteins.
Maria Jose Lista, Adam A Witney, Jenna Nichols, Andrew J Davison, Harry Wilson

J Virol· March 2023

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Emergence of phenotypic and genotypic antimicrobial resistance in Mycobacterium tuberculosis.
Frank Kloprogge, Julio Ortiz Canseco, Lynette Phee, Zahra Sadouki, Karin Kipper, Adam A Witney

Sci Rep· December 2022

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Vaginal microbiota in ethnically diverse young women who did or did not develop pelvic inflammatory disease: community-based prospective study.
Sarah Kerry-Barnard, Liqing Zhou, Laura Phillips, Martina Furegato, Adam A Witney

Sex Transm Infect· November 2022

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Gastrointestinal, vaginal, nasopharyngeal, and breast milk microbiota profiles and breast milk metabolomic changes in Gambian infants over the first two months of lactation: A prospective cohort study.
Konstantinos Karampatsas, Amadou Faal, Mustapha Jaiteh, Isabel Garcia-Perez, Sean Aller, Adam A Witney

Medicine (Baltimore)· November 2022

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Identification of small RNAs associated with RNA chaperone Hfq reveals a new stress response regulator in .
Giarlã Cunha da Silva, Ciro César Rossi, Jéssica Nogueira Rosa, Newton Moreno Sanches, Daniela Lopes Cardoso, Adam A Witney

Front Microbiol· October 2022

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Effectiveness of rapid SARS-CoV-2 genome sequencing in supporting infection control for hospital-onset COVID-19 infection: Multicentre, prospective study.
Oliver Stirrup, James Blackstone, Fiona Mapp, Alyson MacNeil, Monica Panca, Adam A Witney

Elife· September 2022

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Ancient and recent differences in the intrinsic susceptibility of Mycobacterium tuberculosis complex to pretomanid.
Anna Bateson, Julio Ortiz Canseco, Timothy D McHugh, Adam A Witney, Silke Feuerriegel

J Antimicrob Chemother· May 2022

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Adjunctive viral cell culture supports treatment decision-making in patients with secondary humoral immunodeficiency and persistent SARS-CoV-2 infection.
Scott J C Pallett, Rachel Wake, Jonathan Youngs, Cassie Pope, Ngee Keong Tan, Adam A Witney

Br J Haematol· March 2022

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Rare Variation in Drug Metabolism and Long QT Genes and the Genetic Susceptibility to Acquired Long QT Syndrome.
Belinda Gray, Alban-Elouen Baruteau, Albert A Antolin, Alan Pittman, Giselle Sarganas, Adam A Witney

Circ Genom Precis Med· February 2022

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Future-proofing and maximizing the utility of metadata: The PHA4GE SARS-CoV-2 contextual data specification package.
Emma J Griffiths, Ruth E Timme, Catarina Inês Mendes, Andrew J Page, Nabil-Fareed Alikhan, Adam A Witney

Gigascience· February 2022

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Metagenomic profiling of placental tissue suggests DNA virus infection of the placenta is rare.
Adam A Witney, Sean Aller, Blair L Strang

J Gen Virol· November 2021

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