Publications by authors named "Adrian Shepherd"

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nuTCRacker: Predicting the Recognition of HLA-I-Peptide Complexes by αβTCRs for Unseen Peptides.
Justin Barton, Trupti Gore, Meghna Phanichkrivalkosil, Adrian Shepherd, Michele Mishto

Eur J Immunol· July 2025

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A phase 1 trial of human telomerase reverse transcriptase (hTERT) vaccination combined with therapeutic strategies to control immune-suppressor mechanisms.
Nahid Zareian, Oleg Eremin, Hardev Pandha, Richard Baird, Vineet Kwatra, Adrian Shepherd

Exp Biol Med (Maywood)· March 2024

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Evolutionary remodelling of N-terminal domain loops fine-tunes SARS-CoV-2 spike.
Diego Cantoni, Matthew J Murray, Mphatso D Kalemera, Samuel J Dicken, Lenka Stejskal, Adrian J Shepherd

EMBO Rep· October 2022

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An entropic safety catch controls hepatitis C virus entry and antibody resistance.
Lenka Stejskal, Mphatso D Kalemera, Charlotte B Lewis, Machaela Palor, Lucas Walker, Adrian J Shepherd

Elife· July 2022

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Mechanistic diversity in MHC class I antigen recognition.
Camila R R Barbosa, Justin Barton, Adrian J Shepherd, Michele Mishto

Biochem J· December 2021

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Characterization of the UK anthrax vaccine and human immunogenicity.
Tapasvi Modi, David Gervais, Stuart Smith, Julie Miller, Shaan Subramaniam, Adrian Shepherd

Hum Vaccin Immunother· March 2021

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Characterization of the MurT/GatD complex in towards validating a novel anti-tubercular drug target.
Arundhati Maitra, Syamasundari Nukala, Rachael Dickman, Liam T Martin, Tulika Munshi, Adrian J Shepherd

JAC Antimicrob Resist· March 2021

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Cholesterol sensing by CD81 is important for hepatitis C virus entry.
Machaela Palor, Lenka Stejskal, Piya Mandal, Annasara Lenman, María Pía Alberione, Adrian J Shepherd

J Biol Chem· December 2020

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Germline immunoglobulin genes: disease susceptibility genes hidden in plain sight?
Andrew M Collins, Gur Yaari, Adrian J Shepherd, William Lees, Corey T Watson

Curr Opin Syst Biol· December 2020

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sumrep: A Summary Statistic Framework for Immune Receptor Repertoire Comparison and Model Validation.
Branden J Olson, Pejvak Moghimi, Chaim A Schramm, Anna Obraztsova, Duncan Ralph, Adrian J Shepherd

Front Immunol· November 2020

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Flexibility and intrinsic disorder are conserved features of hepatitis C virus E2 glycoprotein.
Lenka Stejskal, William D Lees, David S Moss, Machaela Palor, Richard J Bingham, Adrian J Shepherd

PLoS Comput Biol· February 2020

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OGRDB: a reference database of inferred immune receptor genes.
William Lees, Christian E Busse, Martin Corcoran, Mats Ohlin, Cathrine Scheepers, Adrian J Shepherd

Nucleic Acids Res· January 2020

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VDJbase: an adaptive immune receptor genotype and haplotype database.
Aviv Omer, Or Shemesh, Ayelet Peres, Pazit Polak, Adrian J Shepherd

Nucleic Acids Res· January 2020

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Factor VIII cross-matches to the human proteome reduce the predicted inhibitor risk in missense mutation hemophilia A.
Daniel P Hart, Nazmiye Uzun, Stuart Skelton, Alison Kakoschke, Jacob Househam, Adrian J Shepherd

Haematologica· March 2019

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Increased Epitope Complexity Correlated with Antibody Affinity Maturation and a Novel Binding Mode Revealed by Structures of Rabbit Antibodies against the Third Variable Loop (V3) of HIV-1 gp120.
Ruimin Pan, Yali Qin, Marisa Banasik, William Lees, Adrian J Shepherd

J Virol· April 2018

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Metabolic Pathway Mining.
Jan M Czarnecki, Adrian J Shepherd

Methods Mol Biol· January 2018

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Studying Antibody Repertoires with Next-Generation Sequencing.
William D Lees, Adrian J Shepherd

Methods Mol Biol· January 2018

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Evaluation of a novel multi-immunogen vaccine strategy for targeting 4E10/10E8 neutralizing epitopes on HIV-1 gp41 membrane proximal external region.
Saikat Banerjee, Heliang Shi, Marisa Banasik, Hojin Moon, William Lees, Adrian Shepherd

Virology· May 2017

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Investigating Substitutions in Antibody-Antigen Complexes Using Molecular Dynamics: A Case Study with Broad-spectrum, Influenza A Antibodies.
William D Lees, Lenka Stejskal, David S Moss, Adrian J Shepherd

Front Immunol· February 2017

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HVint: A Strategy for Identifying Novel Protein-Protein Interactions in Herpes Simplex Virus Type 1.
Paul Ashford, Anna Hernandez, Todd Michael Greco, Anna Buch, Beate Sodeik, Adrian Shepherd

Mol Cell Proteomics· September 2016

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Utilities for High-Throughput Analysis of B-Cell Clonal Lineages.
William D Lees, Adrian J Shepherd

J Immunol Res· August 2016

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Missed, Not Missing: Phylogenomic Evidence for the Existence of Avian FoxP3.
Michael P Denyer, Dammy Y Pinheiro, Oliver A Garden, Adrian J Shepherd

PLoS One· August 2016

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Mining biological networks from full-text articles.
Jan Czarnecki, Adrian J Shepherd

Methods Mol Biol· May 2015

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A large-scale computational study of inhibitor risk in non-severe haemophilia A.
Adrian J Shepherd, Stuart Skelton, Clare E Sansom, Keith Gomez, David S Moss

Br J Haematol· February 2015

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N-linked glycans on influenza A H3N2 hemagglutinin constrain binding of host antibodies, but shielding is limited.
Kevin Pentiah, William D Lees, David S Moss, Adrian J Shepherd

Glycobiology· January 2015

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