Publications by authors named "Aijazuddin Syed"

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Interpretable Multiple Instance Learning for Hematologic Diagnosis from Peripheral Blood Smears.
Siddharth Singi, Shenghuan Sun, Zhanghan Yin, Riya Gupta, Dylan Webb, Aijazuddin Syed

Res Sq· October 2025

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Clinical Bioinformatician Body of Knowledge-Clinical Laboratory Regulation and Data Security Core: A Report of the Association for Molecular Pathology.
Ryan J Schmidt, Larissa V Furtado, Amber M Fussell, Danielle Jordan, Matthew Lebo, Aijazuddin Syed

J Mol Diagn· July 2025

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DeepHeme, a high-performance, generalizable deep ensemble for bone marrow morphometry and hematologic diagnosis.
Shenghuan Sun, Zhanghan Yin, Jacob G Van Cleave, Linlin Wang, Brenda Fried, Aijazuddin Syed

Sci Transl Med· June 2025

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Deep-Learning Model for Tumor-Type Prediction Using Targeted Clinical Genomic Sequencing Data.
Madison Darmofal, Shalabh Suman, Gurnit Atwal, Michael Toomey, Jie-Fu Chen, Aijazuddin Syed

Cancer Discov· June 2024

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DNA Mutational and Copy Number Variation Profiling of Primary Craniofacial Osteosarcomas by Next-Generation Sequencing.
Gord Guo Zhu, Chuanyong Lu, Ivana Petrovic, Khedoudja Nafa, Wen Chen, Aijazuddin Syed

Head Neck Pathol· June 2024

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Quantifying the Expanding Landscape of Clinical Actionability for Patients with Cancer.
Sarah P Suehnholz, Moriah H Nissan, Hongxin Zhang, Ritika Kundra, Subhiksha Nandakumar, Aijazuddin Syed

Cancer Discov· January 2024

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Deep Learning Model for Tumor Type Prediction using Targeted Clinical Genomic Sequencing Data.
Madison Darmofal, Shalabh Suman, Gurnit Atwal, Jie-Fu Chen, Jason C Chang, Aijazuddin Syed

medRxiv· September 2023

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Diagnostic yield and clinical relevance of expanded genetic testing for cancer patients.
Ozge Ceyhan-Birsoy, Gowtham Jayakumaran, Yelena Kemel, Maksym Misyura, Umut Aypar, Aijazuddin Syed

Genome Med· August 2022

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The context-specific role of germline pathogenicity in tumorigenesis.
Preethi Srinivasan, Chaitanya Bandlamudi, Philip Jonsson, Yelena Kemel, Shweta S Chavan, Aijazuddin Syed

Nat Genet· November 2021

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Enhanced specificity of clinical high-sensitivity tumor mutation profiling in cell-free DNA via paired normal sequencing using MSK-ACCESS.
A Rose Brannon, Gowtham Jayakumaran, Monica Diosdado, Juber Patel, Anna Razumova, Aijazuddin Syed

Nat Commun· June 2021

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Cancer therapy shapes the fitness landscape of clonal hematopoiesis.
Kelly L Bolton, Ryan N Ptashkin, Teng Gao, Lior Braunstein, Sean M Devlin, Aijazuddin Syed

Nat Genet· November 2020

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Development of Genome-Derived Tumor Type Prediction to Inform Clinical Cancer Care.
Alexander Penson, Niedzica Camacho, Youyun Zheng, Anna M Varghese, Hikmat Al-Ahmadie, Aijazuddin Syed

JAMA Oncol· January 2020

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Widespread Selection for Oncogenic Mutant Allele Imbalance in Cancer.
Craig M Bielski, Mark T A Donoghue, Mayur Gadiya, Aphrothiti J Hanrahan, Helen H Won, Aijazuddin Syed

Cancer Cell· November 2018

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Clinical Sequencing Defines the Genomic Landscape of Metastatic Colorectal Cancer.
Rona Yaeger, Walid K Chatila, Marla D Lipsyc, Jaclyn F Hechtman, Andrea Cercek, Aijazuddin Syed

Cancer Cell· January 2018

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Therapy-Related Clonal Hematopoiesis in Patients with Non-hematologic Cancers Is Common and Associated with Adverse Clinical Outcomes.
Catherine C Coombs, Ahmet Zehir, Sean M Devlin, Ashwin Kishtagari, Aijazuddin Syed

Cell Stem Cell· September 2017

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Mutation Detection in Patients With Advanced Cancer by Universal Sequencing of Cancer-Related Genes in Tumor and Normal DNA vs Guideline-Based Germline Testing.
Diana Mandelker, Liying Zhang, Yelena Kemel, Zsofia K Stadler, Vijai Joseph, Aijazuddin Syed

JAMA· September 2017

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Erratum: Mutational landscape of metastatic cancer revealed from prospective clinical sequencing of 10,000 patients.
Ahmet Zehir, Ryma Benayed, Ronak H Shah, Aijazuddin Syed, Sumit Middha, Mustafa H Syed

Nat Med· August 2017

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Prospective Genomic Profiling of Prostate Cancer Across Disease States Reveals Germline and Somatic Alterations That May Affect Clinical Decision Making.
Wassim Abida, Joshua Armenia, Anuradha Gopalan, Ryan Brennan, Michael Walsh, Aijazuddin Syed

JCO Precis Oncol· July 2017

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Mutational landscape of metastatic cancer revealed from prospective clinical sequencing of 10,000 patients.
Ahmet Zehir, Ryma Benayed, Ronak H Shah, Aijazuddin Syed, Sumit Middha, Mustafa H Syed

Nat Med· June 2017

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Comprehensive detection of germline variants by MSK-IMPACT, a clinical diagnostic platform for solid tumor molecular oncology and concurrent cancer predisposition testing.
Donavan T Cheng, Meera Prasad, Yvonne Chekaluk, Ryma Benayed, Justyna Sadowska, Aijazuddin Syed

BMC Med Genomics· May 2017

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Genetic Determinants of Cisplatin Resistance in Patients With Advanced Germ Cell Tumors.
Aditya Bagrodia, Byron H Lee, William Lee, Eugene K Cha, John P Sfakianos, Aijazuddin Syed

J Clin Oncol· November 2016

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Translational Bioinformatics and Clinical Research (Biomedical) Informatics.
S Joseph Sirintrapun, Ahmet Zehir, Aijazuddin Syed, JianJiong Gao, Nikolaus Schultz

Clin Lab Med· March 2016

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Translational Bioinformatics and Clinical Research (Biomedical) Informatics.
S Joseph Sirintrapun, Ahmet Zehir, Aijazuddin Syed, JianJiong Gao, Nikolaus Schultz

Surg Pathol Clin· June 2015

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Memorial Sloan Kettering-Integrated Mutation Profiling of Actionable Cancer Targets (MSK-IMPACT): A Hybridization Capture-Based Next-Generation Sequencing Clinical Assay for Solid Tumor Molecular Oncology.
Donavan T Cheng, Talia N Mitchell, Ahmet Zehir, Ronak H Shah, Ryma Benayed, Aijazuddin Syed

J Mol Diagn· May 2015

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Detection of mutations in myeloid malignancies through paired-sample analysis of microdroplet-PCR deep sequencing data.
Donavan T Cheng, Janice Cheng, Talia N Mitchell, Aijazuddin Syed, Ahmet Zehir

J Mol Diagn· September 2014

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