Publications by authors named "Brian Mannakee"

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Genomic landscape of lymphatic malformations: a case series and response to the PI3Kα inhibitor alpelisib in an -of-1 clinical trial.
Montaser F Shaheen, Julie Y Tse, Ethan S Sokol, Margaret Masterson, Pranshu Bansal, Brian K Mannakee

Elife· July 2022

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BATCAVE: calling somatic mutations with a tumor- and site-specific prior.
Brian K Mannakee, Ryan N Gutenkunst

NAR Genom Bioinform· March 2020

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The impact of genome-wide association studies on biomedical research publications.
Travis J Struck, Brian K Mannakee, Ryan N Gutenkunst

Hum Genomics· August 2018

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Sensitive and specific post-call filtering of genetic variants in xenograft and primary tumors.
Brian K Mannakee, Uthra Balaji, Agnieszka K Witkiewicz, Ryan N Gutenkunst, Erik S Knudsen

Bioinformatics· May 2018

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Pancreatic cancer cell lines as patient-derived avatars: genetic characterisation and functional utility.
Erik S Knudsen, Uthra Balaji, Brian Mannakee, Paris Vail, Cody Eslinger

Gut· March 2018

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Selection on Network Dynamics Drives Differential Rates of Protein Domain Evolution.
Brian K Mannakee, Ryan N Gutenkunst

PLoS Genet· July 2016

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Characterizing selective pressures on the pathway for de novo biosynthesis of pyrimidines in yeast.
Russell A Hermansen, Brian K Mannakee, Wolfgang Knecht, David A Liberles, Ryan N Gutenkunst

BMC Evol Biol· October 2015

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Testing whether metazoan tyrosine loss was driven by selection against promiscuous phosphorylation.
Siddharth Pandya, Travis J Struck, Brian K Mannakee, Mary Paniscus, Ryan N Gutenkunst

Mol Biol Evol· January 2015

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Loss of amino-terminal acetylation suppresses a prion phenotype by modulating global protein folding.
William M Holmes, Brian K Mannakee, Ryan N Gutenkunst, Tricia R Serio

Nat Commun· July 2014

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