Publications by authors named "Chinnappa D Kodira"

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Distinct positions of genetic and oral histories: Perspectives from India.
Arjun Biddanda, Esha Bandyopadhyay, Constanza de la Fuente Castro, David Witonsky, Jose A Urban Aragon, Chinnappa Dilip Kodira

HGG Adv· July 2024

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Meningeal lymphatics affect microglia responses and anti-Aβ immunotherapy.
Sandro Da Mesquita, Zachary Papadopoulos, Taitea Dykstra, Logan Brase, Fabiana Geraldo Farias, Chinnappa Dilip Kodira

Nature· May 2021

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Computational de novo discovery of distinguishing genes for biological processes and cell types in complex tissues.
Lee A Newberg, Xiaowei Chen, Chinnappa D Kodira, Maria I Zavodszky

PLoS One· June 2018

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Genome Sequence of , an Emerging Fungal Pathogen of Snakes.
Mana Ohkura, Robert R Fitak, Jennifer H Wisecaver, Dan DeBlasio, Faheem Niazi, Chinnappa D Kodira

Genome Announc· July 2017

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Analysis of the genome and transcriptome of Cryptococcus neoformans var. grubii reveals complex RNA expression and microevolution leading to virulence attenuation.
Guilhem Janbon, Kate L Ormerod, Damien Paulet, Edmond J Byrnes, Vikas Yadav, Chinnappa D Kodira

PLoS Genet· April 2014

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Evolutionary dynamics of the accessory genome of Listeria monocytogenes.
Henk C den Bakker, Christopher A Desjardins, Allison D Griggs, Joseph E Peters, Qiandong Zeng, Chinnappa D Kodira

PLoS One· February 2014

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Comparative genomics of a plant-pathogenic fungus, Pyrenophora tritici-repentis, reveals transduplication and the impact of repeat elements on pathogenicity and population divergence.
Viola A Manning, Iovanna Pandelova, Braham Dhillon, Larry J Wilhelm, Stephen B Goodwin, Chinnappa D Kodira

G3 (Bethesda)· January 2013

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Comparative genomic analysis of human fungal pathogens causing paracoccidioidomycosis.
Christopher A Desjardins, Mia D Champion, Jason W Holder, Anna Muszewska, Jonathan Goldberg, Chinnappa D Kodira

PLoS Genet· October 2011

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Comparative and functional genomics of Rhodococcus opacus PD630 for biofuels development.
Jason W Holder, Jil C Ulrich, Anthony C DeBono, Paul A Godfrey, Christopher A Desjardins, Chinnappa D Kodira

PLoS Genet· September 2011

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Obligate biotrophy features unraveled by the genomic analysis of rust fungi.
Sébastien Duplessis, Christina A Cuomo, Yao-Cheng Lin, Andrea Aerts, Emilie Tisserant, Chinnappa D Kodira

Proc Natl Acad Sci U S A· May 2011

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Sequencing of Culex quinquefasciatus establishes a platform for mosquito comparative genomics.
Peter Arensburger, Karine Megy, Robert M Waterhouse, Jenica Abrudan, Paolo Amedeo, Chinnappa D Kodira

Science· October 2010

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Pathogenomics of Culex quinquefasciatus and meta-analysis of infection responses to diverse pathogens.
Lyric C Bartholomay, Robert M Waterhouse, George F Mayhew, Corey L Campbell, Kristin Michel, Chinnappa D Kodira

Science· October 2010

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Genome-wide characterization of simple sequence repeats in cucumber (Cucumis sativus L.).
Pablo F Cavagnaro, Douglas A Senalik, Luming Yang, Philipp W Simon, Timothy T Harkins, Chinnappa D Kodira

BMC Genomics· October 2010

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A catalog of reference genomes from the human microbiome.

Science· May 2010

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Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium.
Li-Jun Ma, H Charlotte van der Does, Katherine A Borkovich, Jeffrey J Coleman, Marie-Josée Daboussi, Chinnappa D Kodira

Nature· March 2010

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Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives.
Thomas J Sharpton, Jason E Stajich, Steven D Rounsley, Malcolm J Gardner, Jennifer R Wortman, Chinnappa D Kodira

Genome Res· October 2009

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Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans.
Brian J Haas, Sophien Kamoun, Michael C Zody, Rays H Y Jiang, Robert E Handsaker, Chinnappa D Kodira

Nature· September 2009

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Genomic analysis of the basal lineage fungus Rhizopus oryzae reveals a whole-genome duplication.
Li-Jun Ma, Ashraf S Ibrahim, Christopher Skory, Manfred G Grabherr, Gertraud Burger, Chinnappa D Kodira

PLoS Genet· July 2009

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Comparative genomic characterization of Francisella tularensis strains belonging to low and high virulence subspecies.
Mia D Champion, Qiandong Zeng, Eli B Nix, Francis E Nano, Paul Keim, Chinnappa D Kodira

PLoS Pathog· May 2009

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Toward an online repository of Standard Operating Procedures (SOPs) for (meta)genomic annotation.
Samuel V Angiuoli, Aaron Gussman, William Klimke, Guy Cochrane, Dawn Field, Chinnappa D Kodira

OMICS· June 2008

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Analysis of the DNA sequence and duplication history of human chromosome 15.
Michael C Zody, Manuel Garber, Ted Sharpe, Sarah K Young, Lee Rowen, Chinnappa D Kodira

Nature· March 2006

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DNA sequence and analysis of human chromosome 8.
Chad Nusbaum, Tarjei S Mikkelsen, Michael C Zody, Shuichi Asakawa, Stefan Taudien, Chinnappa D Kodira

Nature· January 2006

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DNA sequence and analysis of human chromosome 18.
Chad Nusbaum, Michael C Zody, Mark L Borowsky, Michael Kamal, Chinnappa D Kodira

Nature· September 2005

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The complete genome and proteome of Mycoplasma mobile.
Jacob D Jaffe, Nicole Stange-Thomann, Cherylyn Smith, David DeCaprio, Sheila Fisher, Chinnappa D Kodira

Genome Res· August 2004

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A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome.
Richard J Mural, Mark D Adams, Eugene W Myers, Hamilton O Smith, George L Gabor Miklos, Chinnappa D Kodira

Science· May 2002

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