Publications by authors named "Daniel Mullen"

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Tracing regulatory element networks using epigenetic traits to identify key transcription factors: TENET R/Bioconductor package.
Daniel J Mullen, Zexun Wu, Ethan Nelson-Moore, Huan Cao, Lauren Han

Bioinformatics· August 2025

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Leveraging Nursing Assessment for Early Identification of Post Operative Gastrointestinal Dysfunction (POGD) in Patients Undergoing Colorectal Surgery.
Tessy Siby, Alice Shajimon, Daniel Mullen, Shahnaz Gillani, Jeffrey R Ong

Curr Oncol· June 2024

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Alveolar type I cells can give rise to KRAS-induced lung adenocarcinoma.
Minxiao Yang, Hua Shen, Per Flodby, Michael D Koss, Rania Bassiouni, Daniel J Mullen

Cell Rep· December 2023

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A comparison of intra-operative diagnosis to histopathological diagnosis of acute appendicitis in paediatric and adult cohorts: an analysis of over 1000 patients.
Johnathon Harris, Christina A Fleming, Paul N Stassen, Daniel Mullen, Helen Mohan

Ir J Med Sci· August 2022

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The Sulfotransferase Is Epigenetically Activated and Transcriptionally Induced by Tobacco Exposure and Is Associated with Patient Outcome in Lung Adenocarcinoma.
Candace Johnson, Daniel J Mullen, Suhaida A Selamat, Mihaela Campan, Ite A Offringa

Int J Environ Res Public Health· December 2021

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Endoplasmic reticulum chaperone GRP78/BiP is critical for mutant Kras-driven lung tumorigenesis.
Daisy Flores Rangel, Louis Dubeau, Ryan Park, Priscilla Chan, Dat P Ha, Daniel J Mullen

Oncogene· May 2021

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TENET 2.0: Identification of key transcriptional regulators and enhancers in lung adenocarcinoma.
Daniel J Mullen, Chunli Yan, Diane S Kang, Beiyun Zhou, Zea Borok

PLoS Genet· September 2020

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Is an Epigenetically Regulated Tumor Suppressor Essential for Activation of the DNA Damage Response.
Shandy Shahabi, Vishaly Kumaran, Jonathan Castillo, Zhengmin Cong, Gopika Nandagopal, Daniel J Mullen

Cancer Res· June 2019

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Predictors of acute throat or esophageal patient reported pain during radiation therapy for head and neck cancer.
Hiram A Gay, Jung Hun Oh, Aditya P Apte, Mackenzie D Daly, Douglas R Adkins, Daniel F Mullen

Clin Transl Radiat Oncol· November 2018

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Post-operative radiation effects on lymphopenia, neutrophil to lymphocyte ratio, and clinical outcomes in palatine tonsil cancers.
Alexander J Lin, Yuan James Rao, Re-I Chin, Jian Campian, Daniel Mullen

Oral Oncol· November 2018

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Cardiac dose is associated with immunosuppression and poor survival in locally advanced non-small cell lung cancer.
Jessika A Contreras, Alexander J Lin, Ashley Weiner, Christina Speirs, Pamela Samson, Daniel Mullen

Radiother Oncol· September 2018

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Positional integration of lung adenocarcinoma susceptibility loci with primary human alveolar epithelial cell epigenomes.
Chenchen Yang, Theresa Ryan Stueve, Chunli Yan, Suhn K Rhie, Daniel J Mullen

Epigenomics· September 2018

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Association of internal smoking dose with blood DNA methylation in three racial/ethnic populations.
Sungshim L Park, Yesha M Patel, Lenora W M Loo, Daniel J Mullen, Ite A Offringa

Clin Epigenetics· August 2018

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Effect of Radiation Treatment Volume Reduction on Lymphopenia in Patients Receiving Chemoradiotherapy for Glioblastoma.
Soumon Rudra, Caressa Hui, Yuan J Rao, Pamela Samson, Alexander J Lin, Daniel Mullen

Int J Radiat Oncol Biol Phys· May 2018

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Epigenome-wide analysis of DNA methylation in lung tissue shows concordance with blood studies and identifies tobacco smoke-inducible enhancers.
Theresa Ryan Stueve, Wen-Qing Li, Jianxin Shi, Crystal N Marconett, Tongwu Zhang, Daniel Mullen

Hum Mol Genet· August 2017

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Distant intracranial failure in melanoma brain metastases treated with stereotactic radiosurgery in the era of immunotherapy and targeted agents.
Sahaja Acharya, Mustafaa Mahmood, Daniel Mullen, Deshan Yang, Christina I Tsien

Adv Radiat Oncol· August 2017

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Accelerated partial breast irradiation dosimetric criteria for the strut-adjusted volume implant.
Karen E Mooney, Michael B Altman, Sharbacha Edward, Jose Garcia-Ramirez, Maria A Thomas, Daniel Mullen

Brachytherapy· July 2017

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Association of post-treatment positron emission tomography with locoregional control and survival after radiation therapy for squamous cell carcinoma of the vulva.
Yuan James Rao, Comron Hassanzadeh, Anupama Chundury, Caressa Hui, Barry A Siegel, Daniel Mullen

Radiother Oncol· March 2017

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Heart Dose Is an Independent Dosimetric Predictor of Overall Survival in Locally Advanced Non-Small Cell Lung Cancer.
Christina K Speirs, Todd A DeWees, Sana Rehman, Alerson Molotievschi, Maria A Velez, Daniel Mullen

J Thorac Oncol· February 2017

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Intensity modulated radiation therapy for squamous cell carcinoma of the vulva: Treatment technique and outcomes.
Yuan James Rao, Anupama Chundury, Julie K Schwarz, Comron Hassanzadeh, Todd DeWees, Daniel Mullen

Adv Radiat Oncol· February 2017

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Lymphovascular space invasion and lack of downstaging after neoadjuvant chemotherapy are strong predictors of adverse outcome in young women with locally advanced breast cancer.
Shariq S Khwaja, Jennifer Ivanovich, Todd A DeWees, Laura Ochoa, Daniel F Mullen

Cancer Med· February 2016

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Clinical and Dosimetric Predictors of Acute Severe Lymphopenia During Radiation Therapy and Concurrent Temozolomide for High-Grade Glioma.
Jiayi Huang, Todd A DeWees, Shahed N Badiyan, Christina K Speirs, Daniel F Mullen

Int J Radiat Oncol Biol Phys· August 2015

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Synthesis and characterization of the 47-residue heterodimeric antimicrobial peptide distinctin, featuring directed disulfide bridge formation.
Daniel G Mullen, Raffaello Verardi, Fernando Porcelli, Andrea Scaloni, George Barany

Biopolymers· April 2014

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Allosteric regulation of SERCA by phosphorylation-mediated conformational shift of phospholamban.
Martin Gustavsson, Raffaello Verardi, Daniel G Mullen, Kaustubh R Mote, Nathaniel J Traaseth

Proc Natl Acad Sci U S A· October 2013

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Synthesis of peptides containing C-terminal methyl esters using trityl side-chain anchoring: application to the synthesis of a-factor and a-factor analogs.
Veronica Diaz-Rodriguez, Daniel G Mullen, Elena Ganusova, Jeffrey M Becker, Mark D Distefano

Org Lett· November 2012

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