Publications by authors named "David Hendrickson"

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Ribosome heterogeneity arising from common and rare rRNA sequence variants affects diverse human phenotypes.
Daphna Rothschild, Anil Raj, Jordan Brown, Nathaniel Thayer, Manuel Hotz, David Hendrickson

medRxiv· November 2025

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A data analysis framework for combining multiple batches increases the power of isobaric proteomics experiments.
Jonathon J O'Brien, Anil Raj, Aleksandr Gaun, Adam Waite, Wenzhou Li, David G Hendrickson

Nat Methods· February 2024

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Individual cell types in C. elegans age differently and activate distinct cell-protective responses.
Antoine Emile Roux, Han Yuan, Katie Podshivalova, David Hendrickson, Rex Kerr

Cell Rep· August 2023

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rDNA array length is a major determinant of replicative lifespan in budding yeast.
Manuel Hotz, Nathaniel H Thayer, David G Hendrickson, Elizabeth L Schinski, Jun Xu

Proc Natl Acad Sci U S A· April 2022

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Novel insights from a multiomics dissection of the Hayflick limit.
Michelle Chan, Han Yuan, Ilya Soifer, Tobias M Maile, Rebecca Y Wang, David G Hendrickson

Elife· February 2022

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Loss of major nutrient sensing and signaling pathways suppresses starvation lethality in electron transport chain mutants.
Alisha G Lewis, Robert Caldwell, Jason V Rogers, Maria Ingaramo, Rebecca Y Wang, David G Hendrickson

Mol Biol Cell· December 2021

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Differentiation reveals latent features of aging and an energy barrier in murine myogenesis.
Jacob C Kimmel, Nelda Yi, Margaret Roy, David G Hendrickson, David R Kelley

Cell Rep· April 2021

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A tps1Δ persister-like state in Saccharomyces cerevisiae is regulated by MKT1.
Patrick A Gibney, Anqi Chen, Ariel Schieler, Jonathan C Chen, Yifan Xu, David G Hendrickson

PLoS One· September 2020

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Solo: Doublet Identification in Single-Cell RNA-Seq via Semi-Supervised Deep Learning.
Nicholas J Bernstein, Nicole L Fong, Irene Lam, Margaret A Roy, David G Hendrickson

Cell Syst· July 2020

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Learning causal networks using inducible transcription factors and transcriptome-wide time series.
Sean R Hackett, Edward A Baltz, Marc Coram, Bernd J Wranik, Griffin Kim, David G Hendrickson

Mol Syst Biol· March 2020

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Murine single-cell RNA-seq reveals cell-identity- and tissue-specific trajectories of aging.
Jacob C Kimmel, Lolita Penland, Nimrod D Rubinstein, David G Hendrickson, David R Kelley

Genome Res· December 2019

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Simultaneous Profiling of DNA Accessibility and Gene Expression Dynamics with ATAC-Seq and RNA-Seq.
David G Hendrickson, Ilya Soifer, Bernd J Wranik, David Botstein, R Scott McIsaac

Methods Mol Biol· March 2019

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A new experimental platform facilitates assessment of the transcriptional and chromatin landscapes of aging yeast.
David G Hendrickson, Ilya Soifer, Bernd J Wranik, Griffin Kim, Michael Robles

Elife· October 2018

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An estradiol-inducible promoter enables fast, graduated control of gene expression in fission yeast.
Makoto J Ohira, David G Hendrickson, R Scott McIsaac, Nicholas Rhind

Yeast· August 2017

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LINC00520 is induced by Src, STAT3, and PI3K and plays a functional role in breast cancer.
Whitney S Henry, David G Hendrickson, Francisco Beca, Benjamin Glass, Marianne Lindahl-Allen

Oncotarget· December 2016

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Genome-wide RNA-Seq of Human Motor Neurons Implicates Selective ER Stress Activation in Spinal Muscular Atrophy.
Shi-Yan Ng, Boon Seng Soh, Natalia Rodriguez-Muela, David G Hendrickson, Feodor Price

Cell Stem Cell· November 2015

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Transposable elements modulate human RNA abundance and splicing via specific RNA-protein interactions.
David R Kelley, David G Hendrickson, Danielle Tenen, John L Rinn

Genome Biol· December 2014

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miR-142 regulates the tumorigenicity of human breast cancer stem cells through the canonical WNT signaling pathway.
Taichi Isobe, Shigeo Hisamori, Daniel J Hogan, Maider Zabala, David G Hendrickson

Elife· November 2014

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Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre.
Ezgi Hacisuleyman, Loyal A Goff, Cole Trapnell, Adam Williams, Jorge Henao-Mejia, David G Hendrickson

Nat Struct Mol Biol· February 2014

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Long noncoding RNAs regulate adipogenesis.
Lei Sun, Loyal A Goff, Cole Trapnell, Ryan Alexander, Kinyui Alice Lo, David G Hendrickson

Proc Natl Acad Sci U S A· February 2013

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Differential analysis of gene regulation at transcript resolution with RNA-seq.
Cole Trapnell, David G Hendrickson, Martin Sauvageau, Loyal Goff, John L Rinn

Nat Biotechnol· January 2013

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Programming human pluripotent stem cells into white and brown adipocytes.
Tim Ahfeldt, Robert T Schinzel, Youn-Kyoung Lee, David Hendrickson, Adam Kaplan

Nat Cell Biol· January 2012

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Cationic Mn4 single-molecule magnet with a sterically isolated core.
Katie J Heroux, Hajrah M Quddusi, Junjie Liu, James R O'Brien, Motohiro Nakano, David N Hendrickson

Inorg Chem· August 2011

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Isostructural single-chain and single-molecule magnets.
Patrick L Feng, Casey J Stephenson, David N Hendrickson

Inorg Chem· July 2010

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The Face-to-Face Light Detection Paradigm: A New Methodology for Investigating Visuospatial Attention Across Different Face Regions in Live Face-to-Face Communication Settings.
Laura A Thompson, Daniel M Malloy, John M Cone, David L Hendrickson

Interact Stud· January 2010

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