Publications by authors named "David Nicholson"

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Nascent RNA Folding and RNP Assembly Revealed by Single-molecule Microscopy.
Andrés Bustamante, Tucker J Carrocci, David A Nicholson, Margaret L Rodgers

J Mol Biol· January 2026

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Harmonize rules for digital sequence information benefit-sharing across UN frameworks.
Scarlett Sett, W John Kress, Michael Halewood, David Nicholson, Genuar Nuñez-Vega

Nat Commun· October 2024

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Kinetic and Thermodynamic Control of G-Quadruplex Polymorphism by Na and K Cations.
David A Nicholson, David J Nesbitt

J Phys Chem B· August 2023

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Changing word meanings in biomedical literature reveal pandemics and new technologies.
David N Nicholson, Faisal Alquaddoomi, Vincent Rubinetti, Casey S Greene

BioData Min· May 2023

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Real-time quality control of optical backscattering data from Biogeochemical-Argo floats.
Giorgio Dall'Olmo, Udaya Bhaskar Tvs, Henry Bittig, Emmanuel Boss, Jodi Brewster, David Nicholson

Open Res Eur· May 2023

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Dissolved gases in the deep North Atlantic track ocean ventilation processes.
Alan M Seltzer, David P Nicholson, William M Smethie, Rebecca L Tyne, Emilie Le Roy

Proc Natl Acad Sci U S A· March 2023

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100 million years of turtle paleoniche dynamics enable the prediction of latitudinal range shifts in a warming world.
Alfio Alessandro Chiarenza, Amy M Waterson, Daniela N Schmidt, Paul J Valdes, Chris Yesson, David B Nicholson

Curr Biol· January 2023

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Hetnet connectivity search provides rapid insights into how two biomedical entities are related.
Daniel S Himmelstein, Michael Zietz, Vincent Rubinetti, Kyle Kloster, Benjamin J Heil, David N Nicholson

bioRxiv· January 2023

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Hetnet connectivity search provides rapid insights into how biomedical entities are related.
Daniel S Himmelstein, Michael Zietz, Vincent Rubinetti, Kyle Kloster, Benjamin J Heil, David N Nicholson

Gigascience· December 2022

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Expanding a database-derived biomedical knowledge graph via multi-relation extraction from biomedical abstracts.
David N Nicholson, Daniel S Himmelstein, Casey S Greene

BioData Min· October 2022

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Experiments and Modeling of Flow-Enhanced Nucleation in LLDPE.
David A Nicholson, Marat Andreev, Kenneth L Kearns, Marius Chyasnavichyus, Daria Monaenkova

J Phys Chem B· September 2022

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Characterization of the genome and silk-gland transcriptomes of Darwin's bark spider (Caerostris darwini).
Paul L Babb, Matjaž Gregorič, Nicholas F Lahens, David N Nicholson, Cheryl Y Hayashi

PLoS One· June 2022

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Could simplified stimuli change how the brain performs visual search tasks? A deep neural network study.
David A Nicholson, Astrid A Prinz

J Vis· June 2022

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Examining linguistic shifts between preprints and publications.
David N Nicholson, Vincent Rubinetti, Dongbo Hu, Marvin Thielk, Lawrence E Hunter

PLoS Biol· February 2022

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Adaptation to genome decay in the structure of the smallest eukaryotic ribosome.
David Nicholson, Marco Salamina, Johan Panek, Karla Helena-Bueno, Charlotte R Brown

Nat Commun· February 2022

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Sal-type ABC-F proteins: intrinsic and common mediators of pleuromutilin resistance by target protection in staphylococci.
Merianne Mohamad, David Nicholson, Chayan Kumar Saha, Vasili Hauryliuk, Thomas A Edwards

Nucleic Acids Res· February 2022

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Multilateral benefit-sharing from digital sequence information will support both science and biodiversity conservation.
Amber Hartman Scholz, Jens Freitag, Christopher H C Lyal, Rodrigo Sara, Martha Lucia Cepeda, David Nicholson

Nat Commun· February 2022

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Automated annotation of birdsong with a neural network that segments spectrograms.
Yarden Cohen, David Aaron Nicholson, Alexa Sanchioni, Emily K Mallaber, Viktoriya Skidanova

Elife· January 2022

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Measuring Excess Heat Capacities of Deoxyribonucleic Acid (DNA) Folding at the Single-Molecule Level.
David A Nicholson, Bin Jia, David J Nesbitt

J Phys Chem B· September 2021

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Pushing Camera-Based Single-Molecule Kinetic Measurements to the Frame Acquisition Limit with Stroboscopic smFRET.
David A Nicholson, David J Nesbitt

J Phys Chem B· June 2021

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Ten important roles for academic leaders to promote equity, diversity, and inclusion in data science.
Jason H Moore, Van Q Truong, Ashley B Robbins, David Nicholson, Clar Lynda Williams-Devane

BioData Min· March 2021

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Chirality-Dependent Amino Acid Modulation of RNA Folding.
David A Nicholson, Abhigyan Sengupta, David J Nesbitt

J Phys Chem B· December 2020

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Spectroscopic analysis in molecular simulations with discretized Wiener-Khinchin theorem for Fourier-Laplace transformation.
Akira Koyama, David A Nicholson, Marat Andreev, Gregory C Rutledge, Koji Fukao

Phys Rev E· December 2020

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Structure of the 70S Ribosome from the Human Pathogen Acinetobacter baumannii in Complex with Clinically Relevant Antibiotics.
David Nicholson, Thomas A Edwards, Alex J O'Neill, Neil A Ranson

Structure· October 2020

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Constructing knowledge graphs and their biomedical applications.
David N Nicholson, Casey S Greene

Comput Struct Biotechnol J· June 2020

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