Publications by authors named "Deanna Church"

Claim this Profile
A
Author Correction: A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing.
Allegra A Petti, Stephen R Williams, Christopher A Miller, Ian T Fiddes, Sridhar N Srivatsan, Deanna M Church

Nat Commun· July 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
A Chromosome-Length Assembly of the Hawaiian Monk Seal (): A History of "Genetic Purging" and Genomic Stability.
David W Mohr, Stephen J Gaughran, Justin Paschall, Ahmed Naguib, Andy Wing Chun Pang, Deanna M Church

Genes (Basel)· July 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
A next-generation human genome sequence.
Deanna M Church

Science· April 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
S
Single-Cell Transcriptomics Reveals Early Emergence of Liver Parenchymal and Non-parenchymal Cell Lineages.
Jeremy Lotto, Sibyl Drissler, Rebecca Cullum, Wei Wei, Manu Setty, Deanna M Church

Cell· October 2020

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
T
Thousands of human sequences provide deep insight into single genomes.
Deanna M Church

Nature· May 2020

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
D
De novo assembly of the olive fruit fly (Bactrocera oleae) genome with linked-reads and long-read technologies minimizes gaps and provides exceptional Y chromosome assembly.
Anthony Bayega, Haig Djambazian, Konstantina T Tsoumani, Maria-Eleni Gregoriou, Efthimia Sagri, Deanna M Church

BMC Genomics· March 2020

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
H
Haplotyping the Vitis collinear core genome with rhAmpSeq improves marker transferability in a diverse genus.
Cheng Zou, Avinash Karn, Bruce Reisch, Allen Nguyen, Yongming Sun, Deanna Church

Nat Commun· January 2020

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
B
Birth, expansion, and death of VCY-containing palindromes on the human Y chromosome.
Wentao Shi, Andrea Massaia, Sandra Louzada, Juliet Handsaker, William Chow, Deanna M Church

Genome Biol· October 2019

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing.
Allegra A Petti, Stephen R Williams, Christopher A Miller, Ian T Fiddes, Sridhar N Srivatsan, Deanna M Church

Nat Commun· August 2019

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
T
The emergent landscape of the mouse gut endoderm at single-cell resolution.
Sonja Nowotschin, Manu Setty, Ying-Yi Kuo, Vincent Liu, Vidur Garg, Deanna M Church

Nature· May 2019

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
R
Resolving the full spectrum of human genome variation using Linked-Reads.
Patrick Marks, Sarah Garcia, Alvaro Martinez Barrio, Kamila Belhocine, Jorge Bernate, Deanna M Church

Genome Res· April 2019

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
Multi-platform discovery of haplotype-resolved structural variation in human genomes.
Mark J P Chaisson, Ashley D Sanders, Xuefang Zhao, Ankit Malhotra, David Porubsky, Deanna M Church

Nat Commun· April 2019

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
G
Genomes for all.
Deanna M Church

Nat Biotechnol· September 2018

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
Corrigendum: Direct determination of diploid genome sequences.
Neil I Weisenfeld, Vijay Kumar, Preyas Shah, Deanna M Church, David B Jaffe

Genome Res· April 2018

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
D
Dissecting the Causal Mechanism of X-Linked Dystonia-Parkinsonism by Integrating Genome and Transcriptome Assembly.
Tatsiana Aneichyk, William T Hendriks, Rachita Yadav, David Shin, Dadi Gao, Deanna M Church

Cell· February 2018

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
R
Reference quality assembly of the 3.5-Gb genome of from a single linked-read library.
Amanda M Hulse-Kemp, Shamoni Maheshwari, Kevin Stoffel, Theresa A Hill, David Jaffe, Deanna M Church

Hortic Res· January 2018

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
P
Principles and Recommendations for Standardizing the Use of the Next-Generation Sequencing Variant File in Clinical Settings.
Ira M Lubin, Nazneen Aziz, Lawrence J Babb, Dennis Ballinger, Himani Bisht, Deanna M Church

J Mol Diagn· May 2017

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
D
Direct determination of diploid genome sequences.
Neil I Weisenfeld, Vijay Kumar, Preyas Shah, Deanna M Church, David B Jaffe

Genome Res· May 2017

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
E
Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly.
Valerie A Schneider, Tina Graves-Lindsay, Kerstin Howe, Nathan Bouk, Hsiu-Chuan Chen, Deanna M Church

Genome Res· May 2017

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
A variant by any name: quantifying annotation discordance across tools and clinical databases.
Jennifer L Yen, Sarah Garcia, Aldrin Montana, Jason Harris, Stephen Chervitz, Deanna M Church

Genome Med· January 2017

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
Alternate-locus aware variant calling in whole genome sequencing.
Marten Jäger, Max Schubach, Tomasz Zemojtel, Knut Reinert, Deanna M Church

Genome Med· December 2016

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
Achieving high-sensitivity for clinical applications using augmented exome sequencing.
Anil Patwardhan, Jason Harris, Nan Leng, Gabor Bartha, Deanna M Church

Genome Med· May 2016

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
Assembly: a resource for assembled genomes at NCBI.
Paul A Kitts, Deanna M Church, Françoise Thibaud-Nissen, Jinna Choi, Vichet Hem

Nucleic Acids Res· January 2016

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
G
Good laboratory practice for clinical next-generation sequencing informatics pipelines.
Amy S Gargis, Lisa Kalman, David P Bick, Cristina da Silva, David P Dimmock, Deanna M Church

Nat Biotechnol· July 2015

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
E
Extending reference assembly models.
Deanna M Church, Valerie A Schneider, Karyn Meltz Steinberg, Michael C Schatz, Aaron R Quinlan

Genome Biol· January 2015

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis